RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 SUSD6Q92537 303 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 PGBD4Q96DM1 585 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 LLPHQ9BRT6 129 aaKnown RBP12.6□□□□□ -0.39
CLCF1-202ENST00000533438 TMEM60Q9H2L4 133 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 NRDE2Q9H7Z3 1164 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 ANKEF1Q9NU02 776 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 TBC1D13Q9NVG8 400 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 PCDHB2Q9Y5E7 798 aa12.6□□□□□ -0.39
CLCF1-202ENST00000533438 CARNS1A5YM72 827 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 C2orf71A6NGG8 1288 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 POTEMA6NI47 508 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 LOC730098B7Z3J9 87 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 ZC3H11AO75152 810 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLCF1-202ENST00000533438 DGAT1O75907 488 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 GALTP07902 379 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 SPATA31C1P0DKV0 1188 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 PTENP60484 403 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 GUCY1B3Q02153 619 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 MXD4Q14582 209 aaPredicted RBP12.59□□□□□ -0.39
CLCF1-202ENST00000533438 SMC1AQ14683 1233 aaKnown RBP12.59□□□□□ -0.39
CLCF1-202ENST00000533438 PCBP1Q15365 356 aaKnown RBP eCLIP12.59□□□□□ -0.39
CLCF1-202ENST00000533438 ANKRD54Q6NXT1 300 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 GLB1LQ6UWU2 654 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 TMEM173Q86WV6 379 aaPredicted RBP12.59□□□□□ -0.39
CLCF1-202ENST00000533438 RNF135Q8IUD6 432 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 MRPL43Q8N983 215 aaKnown RBP12.59□□□□□ -0.39
CLCF1-202ENST00000533438 IGSF21Q96ID5 467 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 ZBP1Q9H171 429 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 S1PR5Q9H228 398 aa12.59□□□□□ -0.39
CLCF1-202ENST00000533438 B4GALT3O60512 393 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 TSPAN1O60635 241 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 SRGAP2BP0DMP2 458 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 XRCC6P12956 609 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLCF1-202ENST00000533438 NCLP19338 710 aaKnown RBP12.58□□□□□ -0.4
CLCF1-202ENST00000533438 AXLP30530 894 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 MCM7P33993 719 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 ARL2P36404 184 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 TECP42680 631 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 AFF1P51825 1210 aaKnown RBP12.58□□□□□ -0.4
CLCF1-202ENST00000533438 CAPSQ13938 189 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 BECN1Q14457 450 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 SAFBQ15424 915 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLCF1-202ENST00000533438 AMHR2Q16671 573 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 SYCE2Q6PIF2 218 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 ZNF280BQ86YH2 543 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 HSCBQ8IWL3 235 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 SMG8Q8ND04 991 aaKnown RBP12.58□□□□□ -0.4
CLCF1-202ENST00000533438 ASAP3Q8TDY4 903 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 PIGOQ8TEQ8 1089 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 BCL7CQ8WUZ0 217 aaPredicted RBP12.58□□□□□ -0.4
CLCF1-202ENST00000533438 TMEM169Q96HH4 297 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 C8orf76Q96K31 380 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 ZSCAN31Q96LW9 406 aaPredicted RBP12.58□□□□□ -0.4
CLCF1-202ENST00000533438 PRRX2Q99811 253 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 PHF7Q9BWX1 381 aaPredicted RBP12.58□□□□□ -0.4
CLCF1-202ENST00000533438 NFKBIZQ9BYH8 718 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 FOXP1Q9H334 677 aaPredicted RBP12.58□□□□□ -0.4
CLCF1-202ENST00000533438 RSAD1Q9HA92 442 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 DNAJB4Q9UDY4 337 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 INPP5FQ9Y2H2 1132 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 HCFC2Q9Y5Z7 792 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 IRAK3Q9Y616 596 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 CNTNAP2Q9UHC6 1331 aa12.58□□□□□ -0.4
CLCF1-202ENST00000533438 K7ELQ4 463 aaPredicted RBP12.57□□□□□ -0.4
CLCF1-202ENST00000533438 INPPL1O15357 1258 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 DDHD2O94830 711 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 ERLIN2O94905 339 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 CTSAP10619 480 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 GLRA2P23416 452 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 SLC11A1P49279 550 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 HMGN5P82970 282 aaKnown RBP12.57□□□□□ -0.4
CLCF1-202ENST00000533438 RNASELQ05823 741 aaKnown RBP12.57□□□□□ -0.4
CLCF1-202ENST00000533438 MBTD1Q05BQ5 628 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 ORC2Q13416 577 aaPredicted RBP12.57□□□□□ -0.4
CLCF1-202ENST00000533438 TFDP1Q14186 410 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 LLGL2Q6P1M3 1020 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 NOTUMQ6P988 496 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 DDX53Q86TM3 631 aaKnown RBP12.57□□□□□ -0.4
CLCF1-202ENST00000533438 CATSPER3Q86XQ3 398 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 VPS52Q8N1B4 723 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 CNNM3Q8NE01 707 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 FBXO18Q8NFZ0 1043 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 VN1R3Q9BXE9 311 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 TUFT1Q9NNX1 390 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 SH2B1Q9NRF2 756 aaPredicted RBP12.57□□□□□ -0.4
CLCF1-202ENST00000533438 MUTYHQ9UIF7 546 aa12.57□□□□□ -0.4
CLCF1-202ENST00000533438 A0A087WWV3 80 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 CLASP2O75122 1294 aaKnown RBP12.56□□□□□ -0.4
CLCF1-202ENST00000533438 MED24O75448 989 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 HOXB8P17481 243 aaPredicted RBP12.56□□□□□ -0.4
CLCF1-202ENST00000533438 ATP2B1P20020 1258 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 TRIM67Q6ZTA4 783 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 URGCPQ8TCY9 931 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 CASP10Q92851 521 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 CCDC51Q96ER9 411 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 CPB2Q96IY4 423 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 TMX3Q96JJ7 454 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 TMEM175Q9BSA9 504 aa12.56□□□□□ -0.4
CLCF1-202ENST00000533438 POLR3CQ9BUI4 534 aaPredicted RBP12.56□□□□□ -0.4
CLCF1-202ENST00000533438 EIF2AQ9BY44 585 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms