RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 KANSL3Q9P2N6 904 aa26.06■■□□□ 1.76
SMPD1-209ENST00000533196 GLP2RO95838 553 aa26.05■■□□□ 1.76
SMPD1-209ENST00000533196 NCLP19338 710 aaKnown RBP26.05■■□□□ 1.76
SMPD1-209ENST00000533196 PBX3P40426 434 aa26.05■■□□□ 1.76
SMPD1-209ENST00000533196 CAPSQ13938 189 aa26.05■■□□□ 1.76
SMPD1-209ENST00000533196 CLUL1Q15846 466 aa26.05■■□□□ 1.76
SMPD1-209ENST00000533196 UBXN11Q5T124 520 aa26.05■■□□□ 1.76
SMPD1-209ENST00000533196 PLPP4Q5VZY2 271 aa26.05■■□□□ 1.76
SMPD1-209ENST00000533196 HAUS3Q68CZ6 603 aa26.05■■□□□ 1.76
SMPD1-209ENST00000533196 NOTUMQ6P988 496 aa26.05■■□□□ 1.76
SMPD1-209ENST00000533196 TMC7Q7Z402 723 aa26.05■■□□□ 1.76
SMPD1-209ENST00000533196 SMRP1Q8NCR6 262 aa26.05■■□□□ 1.76
SMPD1-209ENST00000533196 URGCPQ8TCY9 931 aa26.05■■□□□ 1.76
SMPD1-209ENST00000533196 ASAP3Q8TDY4 903 aa26.05■■□□□ 1.76
SMPD1-209ENST00000533196 STK24Q9Y6E0 443 aa26.05■■□□□ 1.76
SMPD1-209ENST00000533196 INO80B-WBP1J3KQ70 363 aa26.04■■□□□ 1.76
SMPD1-209ENST00000533196 PER2O15055 1255 aa26.04■■□□□ 1.76
SMPD1-209ENST00000533196 TSPAN1O60635 241 aa26.04■■□□□ 1.76
SMPD1-209ENST00000533196 ZC3H11AO75152 810 aaKnown RBP eCLIP26.04■■□□□ 1.76
SMPD1-209ENST00000533196 MED24O75448 989 aa26.04■■□□□ 1.76
SMPD1-209ENST00000533196 GLRA2P23416 452 aa26.04■■□□□ 1.76
SMPD1-209ENST00000533196 FXR2P51116 673 aaKnown RBP eCLIP26.04■■□□□ 1.76
SMPD1-209ENST00000533196 RNASELQ05823 741 aaKnown RBP26.04■■□□□ 1.76
SMPD1-209ENST00000533196 SMC1AQ14683 1233 aaKnown RBP26.04■■□□□ 1.76
SMPD1-209ENST00000533196 AGMOQ6ZNB7 445 aa26.04■■□□□ 1.76
SMPD1-209ENST00000533196 NRDE2Q9H7Z3 1164 aa26.04■■□□□ 1.76
SMPD1-209ENST00000533196 RSAD1Q9HA92 442 aa26.04■■□□□ 1.76
SMPD1-209ENST00000533196 STK39Q9UEW8 545 aa26.04■■□□□ 1.76
SMPD1-209ENST00000533196 MEIS3P2A8K0S8 358 aa26.03■■□□□ 1.76
SMPD1-209ENST00000533196 USO1O60763 962 aaKnown RBP26.03■■□□□ 1.76
SMPD1-209ENST00000533196 ALADP13716 330 aa26.03■■□□□ 1.76
SMPD1-209ENST00000533196 MBTD1Q05BQ5 628 aa26.03■■□□□ 1.76
SMPD1-209ENST00000533196 KCNC3Q14003 757 aa26.03■■□□□ 1.76
SMPD1-209ENST00000533196 POLR3FQ9H1D9 316 aaPredicted RBP26.03■■□□□ 1.76
SMPD1-209ENST00000533196 INPP5FQ9Y2H2 1132 aa26.03■■□□□ 1.76
SMPD1-209ENST00000533196 GALTP07902 379 aa26.02■■□□□ 1.76
SMPD1-209ENST00000533196 MCM2P49736 904 aa26.02■■□□□ 1.76
SMPD1-209ENST00000533196 GIT2Q14161 759 aa26.02■■□□□ 1.76
SMPD1-209ENST00000533196 PDIA5Q14554 519 aa26.02■■□□□ 1.76
SMPD1-209ENST00000533196 LONRF3Q496Y0 759 aa26.02■■□□□ 1.76
SMPD1-209ENST00000533196 DDX53Q86TM3 631 aaKnown RBP26.02■■□□□ 1.76
SMPD1-209ENST00000533196 C4orf32Q8N8J7 132 aa26.02■■□□□ 1.76
SMPD1-209ENST00000533196 MRPL43Q8N983 215 aaKnown RBP26.02■■□□□ 1.76
SMPD1-209ENST00000533196 IGSF21Q96ID5 467 aa26.02■■□□□ 1.76
SMPD1-209ENST00000533196 TMEM175Q9BSA9 504 aa26.02■■□□□ 1.76
SMPD1-209ENST00000533196 RAB34Q9BZG1 259 aa26.02■■□□□ 1.76
SMPD1-209ENST00000533196 CSRNP2Q9H175 543 aa26.02■■□□□ 1.76
SMPD1-209ENST00000533196 BARX2Q9UMQ3 279 aaPredicted RBP26.02■■□□□ 1.76
SMPD1-209ENST00000533196 HIDE1A8MVS5 230 aa26.01■■□□□ 1.75
SMPD1-209ENST00000533196 LAD1O00515 517 aa26.01■■□□□ 1.75
SMPD1-209ENST00000533196 GPR37L1O60883 481 aa26.01■■□□□ 1.75
SMPD1-209ENST00000533196 KHSRPQ92945 711 aaKnown RBP eCLIP26.01■■□□□ 1.75
SMPD1-209ENST00000533196 PRIMPOLQ96LW4 560 aa26.01■■□□□ 1.75
SMPD1-209ENST00000533196 DAXXQ9UER7 740 aaPredicted RBP26.01■■□□□ 1.75
SMPD1-209ENST00000533196 IRAK3Q9Y616 596 aa26.01■■□□□ 1.75
SMPD1-209ENST00000533196 A0A087WWV3 80 aa26■■□□□ 1.75
SMPD1-209ENST00000533196 NT5C1B-RDH14C9J2C7 533 aa26■■□□□ 1.75
SMPD1-209ENST00000533196 INPPL1O15357 1258 aa26■■□□□ 1.75
SMPD1-209ENST00000533196 ITGA4P13612 1032 aa26■■□□□ 1.75
SMPD1-209ENST00000533196 AMHR2Q16671 573 aa26■■□□□ 1.75
SMPD1-209ENST00000533196 TMEM31Q5JXX7 168 aa26■■□□□ 1.75
SMPD1-209ENST00000533196 HACE1Q8IYU2 909 aa26■■□□□ 1.75
SMPD1-209ENST00000533196 SMG8Q8ND04 991 aaKnown RBP26■■□□□ 1.75
SMPD1-209ENST00000533196 VN1R2Q8NFZ6 395 aa26■■□□□ 1.75
SMPD1-209ENST00000533196 FAM193BQ96PV7 902 aaPredicted RBP26■■□□□ 1.75
SMPD1-209ENST00000533196 LRWD1Q9UFC0 647 aa26■■□□□ 1.75
SMPD1-209ENST00000533196 IPPQ9Y573 584 aa26■■□□□ 1.75
SMPD1-209ENST00000533196 ARHGEF35A5YM69 484 aa25.99■■□□□ 1.75
SMPD1-209ENST00000533196 C2orf71A6NGG8 1288 aa25.99■■□□□ 1.75
SMPD1-209ENST00000533196 HOXB8P17481 243 aaPredicted RBP25.99■■□□□ 1.75
SMPD1-209ENST00000533196 CYP11B2P19099 503 aa25.99■■□□□ 1.75
SMPD1-209ENST00000533196 COL9A1P20849 921 aa25.99■■□□□ 1.75
SMPD1-209ENST00000533196 TOB1P50616 345 aaPredicted RBP25.99■■□□□ 1.75
SMPD1-209ENST00000533196 POTEGQ6S5H5 508 aa25.99■■□□□ 1.75
SMPD1-209ENST00000533196 PADI6Q6TGC4 694 aa25.99■■□□□ 1.75
SMPD1-209ENST00000533196 PPP4R3CPQ6ZMV5 832 aa25.99■■□□□ 1.75
SMPD1-209ENST00000533196 VPS52Q8N1B4 723 aa25.99■■□□□ 1.75
SMPD1-209ENST00000533196 CASP10Q92851 521 aa25.99■■□□□ 1.75
SMPD1-209ENST00000533196 TMX3Q96JJ7 454 aa25.99■■□□□ 1.75
SMPD1-209ENST00000533196 ZBP1Q9H171 429 aa25.99■■□□□ 1.75
SMPD1-209ENST00000533196 C2orf40Q9H1Z8 148 aa25.99■■□□□ 1.75
SMPD1-209ENST00000533196 PRMT7Q9NVM4 692 aaPredicted RBP25.99■■□□□ 1.75
SMPD1-209ENST00000533196 TDRD15B5MCY1 1934 aaKnown RBP25.98■■□□□ 1.75
SMPD1-209ENST00000533196 ZMYM2Q9UBW7 1377 aa25.98■■□□□ 1.75
SMPD1-209ENST00000533196 ALDH2P05091 517 aa25.98■■□□□ 1.75
SMPD1-209ENST00000533196 ARF4P18085 180 aaPredicted RBP25.98■■□□□ 1.75
SMPD1-209ENST00000533196 PRPHP41219 470 aa25.98■■□□□ 1.75
SMPD1-209ENST00000533196 PTGDRQ13258 359 aa25.98■■□□□ 1.75
SMPD1-209ENST00000533196 CDCA2Q69YH5 1023 aaPredicted RBP25.98■■□□□ 1.75
SMPD1-209ENST00000533196 ANKRD54Q6NXT1 300 aa25.98■■□□□ 1.75
SMPD1-209ENST00000533196 ZBTB8OSQ8IWT0 167 aa25.98■■□□□ 1.75
SMPD1-209ENST00000533196 IGSF22Q8N9C0 903 aa25.98■■□□□ 1.75
SMPD1-209ENST00000533196 CPB2Q96IY4 423 aa25.98■■□□□ 1.75
SMPD1-209ENST00000533196 TRIM6Q9C030 488 aaPredicted RBP25.98■■□□□ 1.75
SMPD1-209ENST00000533196 GBP3Q9H0R5 595 aa25.98■■□□□ 1.75
SMPD1-209ENST00000533196 USP15Q9Y4E8 981 aaPredicted RBP25.98■■□□□ 1.75
SMPD1-209ENST00000533196 A0A1B0GUA9 196 aa25.97■■□□□ 1.75
SMPD1-209ENST00000533196 LRRIQ4A6NIV6 560 aa25.97■■□□□ 1.75
SMPD1-209ENST00000533196 CTSAP10619 480 aa25.97■■□□□ 1.75
SMPD1-209ENST00000533196 CCT6AP40227 531 aaKnown RBP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms