RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 BLOC1S2Q6QNY1 142 aa12.94□□□□□ -0.34
CMTM1-216ENST00000533078 HACE1Q8IYU2 909 aa12.94□□□□□ -0.34
CMTM1-216ENST00000533078 TBCKQ8TEA7 893 aa12.94□□□□□ -0.34
CMTM1-216ENST00000533078 PSPC1Q8WXF1 523 aaKnown RBP12.94□□□□□ -0.34
CMTM1-216ENST00000533078 SLKQ9H2G2 1235 aaPredicted RBP12.94□□□□□ -0.34
CMTM1-216ENST00000533078 PIDD1Q9HB75 910 aa12.94□□□□□ -0.34
CMTM1-216ENST00000533078 SH3GLB2Q9NR46 395 aa12.94□□□□□ -0.34
CMTM1-216ENST00000533078 AGPAT5Q9NUQ2 364 aa12.94□□□□□ -0.34
CMTM1-216ENST00000533078 VPS54Q9P1Q0 977 aa12.94□□□□□ -0.34
CMTM1-216ENST00000533078 WNT16Q9UBV4 365 aa12.94□□□□□ -0.34
CMTM1-216ENST00000533078 PPME1Q9Y570 386 aa12.94□□□□□ -0.34
CMTM1-216ENST00000533078 COL4A3BPQ9Y5P4 624 aa12.94□□□□□ -0.34
CMTM1-216ENST00000533078 GVINP1Q7Z2Y8 2422 aa12.94□□□□□ -0.34
CMTM1-216ENST00000533078 DNAH14Q0VDD8 3507 aa12.93□□□□□ -0.34
CMTM1-216ENST00000533078 IGKV6-21A0A0C4DH24 114 aa12.93□□□□□ -0.34
CMTM1-216ENST00000533078 CCDC195A0A1B0GUA6 201 aa12.93□□□□□ -0.34
CMTM1-216ENST00000533078 PSMD10O75832 226 aa12.93□□□□□ -0.34
CMTM1-216ENST00000533078 ERLIN2O94905 339 aa12.93□□□□□ -0.34
CMTM1-216ENST00000533078 CFHP08603 1231 aa12.93□□□□□ -0.34
CMTM1-216ENST00000533078 OR1G1P47890 313 aa12.93□□□□□ -0.34
CMTM1-216ENST00000533078 SRGAP1Q7Z6B7 1085 aa12.93□□□□□ -0.34
CMTM1-216ENST00000533078 ZNF280BQ86YH2 543 aa12.93□□□□□ -0.34
CMTM1-216ENST00000533078 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
CMTM1-216ENST00000533078 BCL7CQ8WUZ0 217 aaPredicted RBP12.93□□□□□ -0.34
CMTM1-216ENST00000533078 TCP11Q8WWU5 503 aa12.93□□□□□ -0.34
CMTM1-216ENST00000533078 JAKMIP1Q96N16 626 aaKnown RBP12.93□□□□□ -0.34
CMTM1-216ENST00000533078 RPS6KC1Q96S38 1066 aa12.93□□□□□ -0.34
CMTM1-216ENST00000533078 WDR6Q9NNW5 1121 aaKnown RBP12.93□□□□□ -0.34
CMTM1-216ENST00000533078 NID2Q14112 1375 aa12.93□□□□□ -0.34
CMTM1-216ENST00000533078 CLUHO75153 1309 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 TMEM150BA6NC51 233 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 MEIS3P2A8K0S8 358 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 NRP1O14786 923 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 INPPL1O15357 1258 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 PI15O43692 258 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 GAS2O43903 313 aaKnown RBP12.92□□□□□ -0.34
CMTM1-216ENST00000533078 MARCH6O60337 910 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 CDC45O75419 566 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 POMCP01189 267 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 ITGA4P13612 1032 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 IFNAR1P17181 557 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 NPR3P17342 541 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 PSMA5P28066 241 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 QARSP47897 775 aaKnown RBP12.92□□□□□ -0.34
CMTM1-216ENST00000533078 GLUD2P49448 558 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 PCBP1Q15365 356 aaKnown RBP eCLIP12.92□□□□□ -0.34
CMTM1-216ENST00000533078 AGMOQ6ZNB7 445 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 KSR1Q8IVT5 923 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 SMG7Q92540 1137 aaKnown RBP12.92□□□□□ -0.34
CMTM1-216ENST00000533078 CEP170P1Q96L14 293 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 SH2D3AQ9BRG2 576 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 HERC2P3Q9BVR0 1158 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 RHOBTB2Q9BYZ6 727 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 TRIM6Q9C030 488 aaPredicted RBP12.92□□□□□ -0.34
CMTM1-216ENST00000533078 PLEKHA4Q9H4M7 779 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.92□□□□□ -0.34
CMTM1-216ENST00000533078 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.92□□□□□ -0.34
CMTM1-216ENST00000533078 DDX25Q9UHL0 483 aaKnown RBP12.92□□□□□ -0.34
CMTM1-216ENST00000533078 CA14Q9ULX7 337 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 PCDHA4Q9UN74 947 aa12.92□□□□□ -0.34
CMTM1-216ENST00000533078 PRG3Q9Y2Y8 225 aaPredicted RBP12.92□□□□□ -0.34
CMTM1-216ENST00000533078 ZNF292O60281 2723 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 C2orf16Q68DN1 1984 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 CYP3A7-CYP3A51PA0A087WV96 503 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 CPLX1O14810 134 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 ADAMTS3O15072 1205 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 ASAP2O43150 1006 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 DDHD2O94830 711 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 SRGAP2CP0DJJ0 459 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 SRFP11831 508 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 CYP3A7P24462 503 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 RFC5P40937 340 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 IRX6P78412 446 aaPredicted RBP12.91□□□□□ -0.34
CMTM1-216ENST00000533078 CREMQ03060 361 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 SSRP1Q08945 709 aaKnown RBP12.91□□□□□ -0.34
CMTM1-216ENST00000533078 PLA2G4FQ68DD2 849 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 GALNT17Q6IS24 598 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 CPLX2Q6PUV4 134 aaKnown RBP12.91□□□□□ -0.34
CMTM1-216ENST00000533078 MOXD1Q6UVY6 613 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 OTUD6AQ7L8S5 288 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 MRPL10Q7Z7H8 261 aaKnown RBP12.91□□□□□ -0.34
CMTM1-216ENST00000533078 HDAC7Q8WUI4 952 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 GJA10Q969M2 543 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 CCDC51Q96ER9 411 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 COLEC11Q9BWP8 271 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 VN1R3Q9BXE9 311 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 TBC1D17Q9HA65 648 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 IFT122Q9HBG6 1241 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 EPS15L1Q9UBC2 864 aa12.91□□□□□ -0.34
CMTM1-216ENST00000533078 EP300Q09472 2414 aaPredicted RBP12.91□□□□□ -0.34
CMTM1-216ENST00000533078 TEX28O15482 410 aa12.9□□□□□ -0.34
CMTM1-216ENST00000533078 NARSO43776 548 aaKnown RBP12.9□□□□□ -0.34
CMTM1-216ENST00000533078 TDP2O95551 362 aa12.9□□□□□ -0.34
CMTM1-216ENST00000533078 P4HBP07237 508 aaKnown RBP12.9□□□□□ -0.34
CMTM1-216ENST00000533078 NCLP19338 710 aaKnown RBP12.9□□□□□ -0.34
CMTM1-216ENST00000533078 AXLP30530 894 aa12.9□□□□□ -0.34
CMTM1-216ENST00000533078 SPECC1Q5M775 1068 aa12.9□□□□□ -0.34
CMTM1-216ENST00000533078 NOTUMQ6P988 496 aa12.9□□□□□ -0.34
CMTM1-216ENST00000533078 ANO5Q75V66 913 aa12.9□□□□□ -0.34
CMTM1-216ENST00000533078 DGLUCYQ7Z3D6 616 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms