RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 FAN1Q9Y2M0 1017 aa11.45□□□□□ -0.58
COLCA1-203ENST00000532918 PTPN22Q9Y2R2 807 aa11.45□□□□□ -0.58
COLCA1-203ENST00000532918 TAP1Q03518 808 aa11.45□□□□□ -0.58
COLCA1-203ENST00000532918 ZSCAN26Q16670 478 aa11.45□□□□□ -0.58
COLCA1-203ENST00000532918 MMEL1Q495T6 779 aa11.45□□□□□ -0.58
COLCA1-203ENST00000532918 GRAMD1CQ8IYS0 662 aa11.45□□□□□ -0.58
COLCA1-203ENST00000532918 ANKRD13CQ8N6S4 541 aa11.45□□□□□ -0.58
COLCA1-203ENST00000532918 GOLGA8KD6RF30 607 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 SMARCA1P28370 1054 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 E2F5Q15329 346 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 ZNF394Q53GI3 561 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 PPP6R3Q5H9R7 873 aaPredicted RBP11.44□□□□□ -0.58
COLCA1-203ENST00000532918 SCG3Q8WXD2 468 aaKnown RBP11.44□□□□□ -0.58
COLCA1-203ENST00000532918 SDCCAG3Q96C92 435 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 AIFM3Q96NN9 605 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 TACO1Q9BSH4 297 aaKnown RBP11.44□□□□□ -0.58
COLCA1-203ENST00000532918 DPP7Q9UHL4 492 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 CPS1P31327 1500 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 SPECC1L-ADORA2AF8WAN1 911 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 GAS2O43903 313 aaKnown RBP11.44□□□□□ -0.58
COLCA1-203ENST00000532918 HOXC6P09630 235 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 ADORA2BP29275 332 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 GCLMP48507 274 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 TCP11X2Q5H9J9 407 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 CYP26B1Q9NR63 512 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 H3BRJ5 948 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 RGL2O15211 777 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 OPHN1O60890 802 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 IL18RAPO95256 599 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 TAC1P20366 129 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 RBL2Q08999 1139 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 NAA35Q5VZE5 725 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 LCA5Q86VQ0 697 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 PDIK1LQ8N165 341 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 MGARPQ8TDB4 240 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 COLEC11Q9BWP8 271 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 PRMT7Q9NVM4 692 aaPredicted RBP11.44□□□□□ -0.58
COLCA1-203ENST00000532918 CEP72Q9P209 647 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 ZNF212Q9UDV6 495 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 MIF4GDA9UHW6 222 aaKnown RBP11.44□□□□□ -0.58
COLCA1-203ENST00000532918 ZFXP17010 805 aaPredicted RBP11.44□□□□□ -0.58
COLCA1-203ENST00000532918 SMIM5Q71RC9 77 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 SIRT2Q8IXJ6 389 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 LRRC8CQ8TDW0 803 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 EFCC1Q9HA90 598 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 PDS5AQ29RF7 1337 aaKnown RBP11.44□□□□□ -0.58
COLCA1-203ENST00000532918 ADAMTS13Q76LX8 1427 aa11.44□□□□□ -0.58
COLCA1-203ENST00000532918 POTEFA5A3E0 1075 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 POTEIP0CG38 1075 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 POTEGQ6S5H5 508 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 POTEEQ6S8J3 1075 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 PCGF5Q86SE9 256 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 SLC7A5P2Q9GIP4 190 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 SLC13A4Q9UKG4 626 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 TMEM247A6NEH6 219 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 EIF4A3P38919 411 aaKnown RBP11.43□□□□□ -0.58
COLCA1-203ENST00000532918 PGBD3Q8N328 593 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 GPRASP2Q96D09 838 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 THEGQ9P2T0 379 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 CNOT8Q9UFF9 292 aaKnown RBP11.43□□□□□ -0.58
COLCA1-203ENST00000532918 CAPN7Q9Y6W3 813 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 ABCA6Q8N139 1617 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 POC1B-GALNT4F8VUJ3 575 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 KRT7P08729 469 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 GNA15P30679 374 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 SLMAPQ14BN4 828 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 SV2CQ496J9 727 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 PRAMEF18Q5VWM3 479 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 ALKBH5Q6P6C2 394 aaKnown RBP11.43□□□□□ -0.58
COLCA1-203ENST00000532918 PDCD6IPQ8WUM4 868 aaKnown RBP11.43□□□□□ -0.58
COLCA1-203ENST00000532918 ZBTB9Q96C00 473 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 RRAGCQ9HB90 399 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 TRPC7Q9HCX4 862 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 GPR182O15218 404 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 NKRFO15226 690 aaKnown RBP eCLIP11.43□□□□□ -0.58
COLCA1-203ENST00000532918 NVLO15381 856 aaKnown RBP11.43□□□□□ -0.58
COLCA1-203ENST00000532918 COBLO75128 1261 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 PCSK1P29120 753 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 IL9RQ01113 521 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 TAF1BQ53T94 588 aaPredicted RBP11.43□□□□□ -0.58
COLCA1-203ENST00000532918 TRIM68Q6AZZ1 485 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 FRA10AC1Q70Z53 315 aa11.43□□□□□ -0.58
COLCA1-203ENST00000532918 ZC3H4Q9UPT8 1303 aaKnown RBP11.42□□□□□ -0.58
COLCA1-203ENST00000532918 TTC4O95801 387 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 SNX1Q13596 522 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 TMEM132DQ14C87 1099 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 SPOPLQ6IQ16 392 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 CNPY4Q8N129 248 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 DEPDC1BQ8WUY9 529 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 MAP3K14Q99558 947 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 RIT2Q99578 217 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 MOV10L1Q9BXT6 1211 aaKnown RBP11.42□□□□□ -0.58
COLCA1-203ENST00000532918 NHEJ1Q9H9Q4 299 aaPredicted RBP11.42□□□□□ -0.58
COLCA1-203ENST00000532918 H7C4K7 107 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 SERPINB6P35237 376 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 PSMC1P62191 440 aaKnown RBP11.42□□□□□ -0.58
COLCA1-203ENST00000532918 SPON2Q9BUD6 331 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 Q9H521 79 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 IP6K2Q9UHH9 426 aa11.42□□□□□ -0.58
COLCA1-203ENST00000532918 MADDQ8WXG6 1647 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms