RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 GPRC5CQ9NQ84 441 aa19.11■□□□□ 0.65
PHRF1-204ENST00000532550 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.11■□□□□ 0.65
PHRF1-204ENST00000532550 KIAA1024Q9UPX6 916 aa19.11■□□□□ 0.65
PHRF1-204ENST00000532550 BDP1A6H8Y1 2624 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 LRRIQ4A6NIV6 560 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 MEIS3P2A8K0S8 358 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 CYP11B2P19099 503 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 PRPHP41219 470 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 NDUFV1P49821 464 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 MBTD1Q05BQ5 628 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 UBXN11Q5T124 520 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 AGMOQ6ZNB7 445 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 SLC39A11Q8N1S5 342 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 EFHBQ8N7U6 833 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 URGCPQ8TCY9 931 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 SNX29Q8TEQ0 813 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 CCDC51Q96ER9 411 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 CPB2Q96IY4 423 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 BACH2Q9BYV9 841 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 RSAD1Q9HA92 442 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 NGRNQ9NPE2 291 aaKnown RBP19.1■□□□□ 0.65
PHRF1-204ENST00000532550 UBN1Q9NPG3 1134 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 ENTPD7Q9NQZ7 604 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 TBC1D13Q9NVG8 400 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 KANSL3Q9P2N6 904 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 PCDHGC5Q9Y5F6 944 aa19.1■□□□□ 0.65
PHRF1-204ENST00000532550 CNTNAP2Q9UHC6 1331 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 NT5C1B-RDH14C9J2C7 533 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 PER2O15055 1255 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 LINC01565O15544 149 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 ZC3H11AO75152 810 aaKnown RBP eCLIP19.09■□□□□ 0.65
PHRF1-204ENST00000532550 ITGA4P13612 1032 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 IL9P15248 144 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 NCLP19338 710 aaKnown RBP19.09■□□□□ 0.65
PHRF1-204ENST00000532550 DLX2Q07687 328 aaPredicted RBP19.09■□□□□ 0.65
PHRF1-204ENST00000532550 BMS1Q14692 1282 aaKnown RBP19.09■□□□□ 0.65
PHRF1-204ENST00000532550 ECM1Q16610 540 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 TMC7Q7Z402 723 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 ZBTB8OSQ8IWT0 167 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 TMEM169Q96HH4 297 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 FAM193BQ96PV7 902 aaPredicted RBP19.09■□□□□ 0.65
PHRF1-204ENST00000532550 TCF25Q9BQ70 676 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 TRIM6Q9C030 488 aaPredicted RBP19.09■□□□□ 0.65
PHRF1-204ENST00000532550 GBP3Q9H0R5 595 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 CSRNP2Q9H175 543 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 BHMT2Q9H2M3 363 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 DDX19AQ9NUU7 478 aaKnown RBP19.09■□□□□ 0.65
PHRF1-204ENST00000532550 DNM3Q9UQ16 869 aa19.09■□□□□ 0.65
PHRF1-204ENST00000532550 MUC3AQ02505 3323 aa19.08■□□□□ 0.65
PHRF1-204ENST00000532550 FSD2A1L4K1 749 aa19.08■□□□□ 0.64
PHRF1-204ENST00000532550 FSCN2O14926 492 aa19.08■□□□□ 0.64
PHRF1-204ENST00000532550 ARF4P18085 180 aaPredicted RBP19.08■□□□□ 0.64
PHRF1-204ENST00000532550 CLUL1Q15846 466 aa19.08■□□□□ 0.64
PHRF1-204ENST00000532550 PLPP4Q5VZY2 271 aa19.08■□□□□ 0.64
PHRF1-204ENST00000532550 FAM178BQ8IXR5 827 aa19.08■□□□□ 0.64
PHRF1-204ENST00000532550 CDCA3Q99618 268 aaPredicted RBP19.08■□□□□ 0.64
PHRF1-204ENST00000532550 EIF2AQ9BY44 585 aaKnown RBP19.08■□□□□ 0.64
PHRF1-204ENST00000532550 C2orf40Q9H1Z8 148 aa19.08■□□□□ 0.64
PHRF1-204ENST00000532550 NRDE2Q9H7Z3 1164 aa19.08■□□□□ 0.64
PHRF1-204ENST00000532550 IPPQ9Y573 584 aa19.08■□□□□ 0.64
PHRF1-204ENST00000532550 ALDH2P05091 517 aa19.07■□□□□ 0.64
PHRF1-204ENST00000532550 GALTP07902 379 aa19.07■□□□□ 0.64
PHRF1-204ENST00000532550 ATP2C1P98194 919 aaPredicted RBP19.07■□□□□ 0.64
PHRF1-204ENST00000532550 PPP2R5AQ15172 486 aa19.07■□□□□ 0.64
PHRF1-204ENST00000532550 IL17AQ16552 155 aa19.07■□□□□ 0.64
PHRF1-204ENST00000532550 AMHR2Q16671 573 aa19.07■□□□□ 0.64
PHRF1-204ENST00000532550 HACE1Q8IYU2 909 aa19.07■□□□□ 0.64
PHRF1-204ENST00000532550 SMG8Q8ND04 991 aaKnown RBP19.07■□□□□ 0.64
PHRF1-204ENST00000532550 IFT74Q96LB3 600 aa19.07■□□□□ 0.64
PHRF1-204ENST00000532550 PRIMPOLQ96LW4 560 aa19.07■□□□□ 0.64
PHRF1-204ENST00000532550 PRMT7Q9NVM4 692 aaPredicted RBP19.07■□□□□ 0.64
PHRF1-204ENST00000532550 CD207Q9UJ71 328 aa19.07■□□□□ 0.64
PHRF1-204ENST00000532550 A0A1B0GUA9 196 aa19.06■□□□□ 0.64
PHRF1-204ENST00000532550 B4GALT5O43286 388 aa19.06■□□□□ 0.64
PHRF1-204ENST00000532550 TBX10O75333 385 aa19.06■□□□□ 0.64
PHRF1-204ENST00000532550 POMCP01189 267 aa19.06■□□□□ 0.64
PHRF1-204ENST00000532550 CDC25AP30304 524 aa19.06■□□□□ 0.64
PHRF1-204ENST00000532550 CUL4AQ13619 759 aa19.06■□□□□ 0.64
PHRF1-204ENST00000532550 DUSP6Q16828 381 aa19.06■□□□□ 0.64
PHRF1-204ENST00000532550 TMEM132AQ24JP5 1023 aa19.06■□□□□ 0.64
PHRF1-204ENST00000532550 SLC27A1Q6PCB7 646 aa19.06■□□□□ 0.64
PHRF1-204ENST00000532550 ZNF280BQ86YH2 543 aa19.06■□□□□ 0.64
PHRF1-204ENST00000532550 KIFAP3Q92845 792 aa19.06■□□□□ 0.64
PHRF1-204ENST00000532550 RNF39Q9H2S5 420 aa19.06■□□□□ 0.64
PHRF1-204ENST00000532550 FZD8Q9H461 694 aa19.06■□□□□ 0.64
PHRF1-204ENST00000532550 PP2D1A8MPX8 630 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 HIDE1A8MVS5 230 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 E9PMD0 336 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 EYA4O95677 639 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 CXCL14O95715 111 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 SSTR3P32745 418 aaPredicted RBP19.05■□□□□ 0.64
PHRF1-204ENST00000532550 CA8P35219 290 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 NAMPTP43490 491 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 SMC1AQ14683 1233 aaKnown RBP19.05■□□□□ 0.64
PHRF1-204ENST00000532550 ZRSR1Q15695 479 aaKnown RBP19.05■□□□□ 0.64
PHRF1-204ENST00000532550 MAPK6Q16659 721 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 CDCA2Q69YH5 1023 aaPredicted RBP19.05■□□□□ 0.64
PHRF1-204ENST00000532550 PPP4R3CPQ6ZMV5 832 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 GJD3Q8N144 294 aa19.05■□□□□ 0.64
PHRF1-204ENST00000532550 VPS52Q8N1B4 723 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms