RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 AGMOQ6ZNB7 445 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 TMEM192Q8IY95 271 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 SPIRE2Q8WWL2 714 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 LARP4BQ92615 738 aaKnown RBP15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 KCNN1Q92952 543 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 LPPQ93052 612 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 PRIMPOLQ96LW4 560 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 DRC1Q96MC2 740 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 REEP2Q9BRK0 252 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 EIF2AQ9BY44 585 aaKnown RBP15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 PANK2Q9BZ23 570 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 C2orf40Q9H1Z8 148 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 C17orf75Q9HAS0 396 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 PRMT7Q9NVM4 692 aaPredicted RBP15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 HCSTQ9UBK5 93 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 STK17AQ9UEE5 414 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 CFAP45Q9UL16 551 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 LRFN2Q9ULH4 789 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 PCDHB2Q9Y5E7 798 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 MYO7AQ13402 2215 aa15.4■□□□□ 0.06
TSPAN4-220ENST00000532375 COL4A4P53420 1690 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 ACKR2O00590 384 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 IBSPP21815 317 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 BMPR1AP36894 532 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 DHX8Q14562 1220 aaKnown RBP15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 PAN2Q504Q3 1202 aaKnown RBP15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 RRAGBQ5VZM2 374 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 GPBP1Q86WP2 473 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 CDR2LQ86X02 465 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 KCNG4Q8TDN1 519 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 DNAJC19Q96DA6 116 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 CCDC51Q96ER9 411 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 IFT74Q96LB3 600 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 FIZ1Q96SL8 496 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 TMEM117Q9H0C3 514 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 RNF39Q9H2S5 420 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 CWH43Q9H720 699 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 RNF216Q9NWF9 866 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 CCDC39Q9UFE4 941 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 MTUS1Q9ULD2 1270 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 REV3LO60673 3130 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 CNTNAP2Q9UHC6 1331 aa15.39■□□□□ 0.05
TSPAN4-220ENST00000532375 MYMKA6NI61 221 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 TBKBP1A7MCY6 615 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 OFD1O75665 1012 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 ERLIN2O94905 339 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 PLS3P13797 630 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 NCLP19338 710 aaKnown RBP15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 RAB27AP51159 221 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 AFF1P51825 1210 aaKnown RBP15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 EFNA5P52803 228 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 EEF1DP3Q658K8 133 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 NOTUMQ6P988 496 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 ZBTB8OSQ8IWT0 167 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 TMEM161BQ8NDZ6 487 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 DEPTORQ8TB45 409 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 LEO1Q8WVC0 666 aaPredicted RBP15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 SAMD11Q96NU1 681 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 TMEM134Q9H6X4 195 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 TYW1Q9NV66 732 aaKnown RBP15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 ODF2LQ9ULJ1 636 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 MTCH2Q9Y6C9 303 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 ATG2AQ2TAZ0 1938 aa15.38■□□□□ 0.05
TSPAN4-220ENST00000532375 PRUNE2Q8WUY3 3088 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 H3BNC9 293 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 SLC16A4O15374 487 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 PRKCBP05771 671 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 RB1P06400 928 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 SKIP12755 728 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 CAMK1Q14012 370 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 MAPK6Q16659 721 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 LONRF3Q496Y0 759 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 RESP18Q5W5W9 173 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 CCDC73Q6ZRK6 1079 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 HELQQ8TDG4 1101 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 PDZD7Q9H5P4 517 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 PTPRHQ9HD43 1115 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 KMT5AQ9NQR1 393 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 RBM19Q9Y4C8 960 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 IPPQ9Y573 584 aa15.37■□□□□ 0.05
TSPAN4-220ENST00000532375 TRIP11Q15643 1979 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 PLXNA4Q9HCM2 1894 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 CCDC169A6NNP5 214 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 K7ERI5 159 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 ABLIM1O14639 778 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 INPPL1O15357 1258 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 HOXA2O43364 376 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 B4GALT3O60512 393 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 MAPTP10636 758 aaKnown RBP15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 FOSL2P15408 326 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 TXLNAP40222 546 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 NCKAP1LP55160 1127 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 DMP1Q13316 513 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 PRPF4BQ13523 1007 aaKnown RBP15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 SLC27A1Q6PCB7 646 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 PDILTQ8N807 584 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 RNF169Q8NCN4 708 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 GSTCDQ8NEC7 633 aa15.36■□□□□ 0.05
TSPAN4-220ENST00000532375 FBXO22Q8NEZ5 403 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms