RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 WASF1Q92558 559 aa17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 TMEM169Q96HH4 297 aa17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 RPGRIP1Q96KN7 1286 aa17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 COL4A3BPQ9Y5P4 624 aa17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 ZNF318Q5VUA4 2279 aa17.01■□□□□ 0.31
DEPDC7-204ENST00000532078 WDFY4Q6ZS81 3184 aa17■□□□□ 0.31
DEPDC7-204ENST00000532078 MARCH6O60337 910 aa17■□□□□ 0.31
DEPDC7-204ENST00000532078 ZC3H11AO75152 810 aaKnown RBP eCLIP17■□□□□ 0.31
DEPDC7-204ENST00000532078 TECTAO75443 2155 aa17■□□□□ 0.31
DEPDC7-204ENST00000532078 P4HBP07237 508 aaKnown RBP17■□□□□ 0.31
DEPDC7-204ENST00000532078 RFC5P40937 340 aa17■□□□□ 0.31
DEPDC7-204ENST00000532078 ANKRD1Q15327 319 aa17■□□□□ 0.31
DEPDC7-204ENST00000532078 TPRNQ4KMQ1 711 aa17■□□□□ 0.31
DEPDC7-204ENST00000532078 PIK3AP1Q6ZUJ8 805 aa17■□□□□ 0.31
DEPDC7-204ENST00000532078 PSPC1Q8WXF1 523 aaKnown RBP17■□□□□ 0.31
DEPDC7-204ENST00000532078 CASP10Q92851 521 aa17■□□□□ 0.31
DEPDC7-204ENST00000532078 CEP170P1Q96L14 293 aa17■□□□□ 0.31
DEPDC7-204ENST00000532078 FAM105AQ9NUU6 356 aa17■□□□□ 0.31
DEPDC7-204ENST00000532078 TPCN1Q9ULQ1 816 aa17■□□□□ 0.31
DEPDC7-204ENST00000532078 C2orf71A6NGG8 1288 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 GAS2O43903 313 aaKnown RBP16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 CA8P35219 290 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 NPEPPSP55786 919 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 ANAPC15P60006 121 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 NOMO2Q5JPE7 1267 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 SYCE2Q6PIF2 218 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 TRIM67Q6ZTA4 783 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 KSR1Q8IVT5 923 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 MRPL43Q8N983 215 aaKnown RBP16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 LPPQ93052 612 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 PGBD4Q96DM1 585 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 LXNQ9BS40 222 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 S1PR5Q9H228 398 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 DHX33Q9H6R0 707 aaKnown RBP16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 BRMS1Q9HCU9 246 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 AGPAT5Q9NUQ2 364 aa16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 ORC3Q9UBD5 711 aaPredicted RBP16.99■□□□□ 0.31
DEPDC7-204ENST00000532078 ARID2Q68CP9 1835 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 TMEM221A6NGB7 291 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 NT5C1B-RDH14C9J2C7 533 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 M0R296 226 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 ZNF623O75123 536 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 ZXDAP98168 799 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 RNASELQ05823 741 aaKnown RBP16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 EPHA7Q15375 998 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 NCAPH2Q6IBW4 605 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 OTUD6AQ7L8S5 288 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 BMP8AQ7Z5Y6 402 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 SRGAP1Q7Z6B7 1085 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 SPNS2Q8IVW8 549 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 C4orf19Q8IY42 314 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 SLFN12Q8IYM2 578 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 PRPF31Q8WWY3 499 aaKnown RBP16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 HAS1Q92839 578 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 IFT122Q9HBG6 1241 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 GJB4Q9NTQ9 266 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 TBC1D13Q9NVG8 400 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 WRAP73Q9P2S5 460 aaPredicted RBP16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 INPP5FQ9Y2H2 1132 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 HCFC2Q9Y5Z7 792 aa16.98■□□□□ 0.31
DEPDC7-204ENST00000532078 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 BAG4O95429 457 aaKnown RBP16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 YWHABP31946 246 aaKnown RBP16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 KRT2P35908 639 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 ITIH3Q06033 890 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 EMC2Q15006 297 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 LONRF3Q496Y0 759 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 DMRTA1Q5VZB9 504 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 CES5AQ6NT32 575 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 VPS52Q8N1B4 723 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 TMEM87AQ8NBN3 555 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 URGCPQ8TCY9 931 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 TCP11Q8WWU5 503 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 TMEM143Q96AN5 459 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 IGSF21Q96ID5 467 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 NECTIN4Q96NY8 510 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 APOL5Q9BWW9 433 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 ZBP1Q9H171 429 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 ZSWIM4Q9H7M6 989 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 PLSCR2Q9NRY7 297 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 DZANK1Q9NVP4 752 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 PCDHB2Q9Y5E7 798 aa16.97■□□□□ 0.31
DEPDC7-204ENST00000532078 CNTNAP2Q9UHC6 1331 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 CLASP2O75122 1294 aaKnown RBP16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 CTDNEP1O95476 244 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 CXCL14O95715 111 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 SRGAP2CP0DJJ0 459 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 AK2P54819 239 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 SPIRE1Q08AE8 756 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 LAMTOR4Q0VGL1 99 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 GIT2Q14161 759 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 XKR9Q5GH70 373 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 DDX53Q86TM3 631 aaKnown RBP16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 TMEM173Q86WV6 379 aaPredicted RBP16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 DYDC2Q96IM9 177 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 FBXL18Q96ME1 805 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 GBP3Q9H0R5 595 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 NRDE2Q9H7Z3 1164 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 RGL1Q9NZL6 768 aa16.96■□□□□ 0.31
DEPDC7-204ENST00000532078 STK39Q9UEW8 545 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms