RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 MYL3P08590 195 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 VIPR1P32241 457 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 AFMP43652 599 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 ALDH5A1P51649 535 aaPredicted RBP3.78□□□□□ -1.8
CD44-234ENST00000531873 AGFG1P52594 562 aaKnown RBP3.78□□□□□ -1.8
CD44-234ENST00000531873 ANTXR2P58335 489 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 NKX3-2P78367 333 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 DSC2Q02487 901 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 CACNB2Q08289 660 aaPredicted RBP3.78□□□□□ -1.8
CD44-234ENST00000531873 MGAT2Q10469 447 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 ADAM9Q13443 819 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 IL10RAQ13651 578 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 SEPT2Q15019 361 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 LONRF3Q496Y0 759 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 C4orf46Q504U0 113 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 MUM1L1Q5H9M0 696 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 XRRA1Q6P2D8 792 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 BTNL9Q6UXG8 535 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 NPNTQ6UXI9 565 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 CD300LDQ6UXZ3 194 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 CCDC149Q6ZUS6 474 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 TOGARAM2Q6ZUX3 1019 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 BMP8AQ7Z5Y6 402 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 CAMKK1Q8N5S9 505 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 FBXO15Q8NCQ5 510 aaPredicted RBP3.78□□□□□ -1.8
CD44-234ENST00000531873 DPF2Q92785 391 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 FATE1Q969F0 183 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 CGRRF1Q99675 332 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 ELAC2Q9BQ52 826 aaKnown RBP3.78□□□□□ -1.8
CD44-234ENST00000531873 NOL10Q9BSC4 688 aaKnown RBP3.78□□□□□ -1.8
CD44-234ENST00000531873 TACO1Q9BSH4 297 aaKnown RBP3.78□□□□□ -1.8
CD44-234ENST00000531873 SLC6A17Q9H1V8 727 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 BHMT2Q9H2M3 363 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 GREM2Q9H772 168 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 PTPRHQ9HD43 1115 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 KCND1Q9NSA2 647 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 KCMF1Q9P0J7 381 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 ZFP69BQ9UJL9 534 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 POLHQ9Y253 713 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 DAAM1Q9Y4D1 1078 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 PCDHGB6Q9Y5F9 930 aa3.78□□□□□ -1.8
CD44-234ENST00000531873 IRS2Q9Y4H2 1338 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 NPIPB6E9PJ23 425 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 HRKO00198 91 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 CUTAO60888 179 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 MED14OSP0DP75 135 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 HTR1BP28222 390 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 MAP2K6P52564 334 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 ITGA1P56199 1179 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 FAM193AP78312 1265 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 CD83Q01151 205 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 TMEM62Q0P6H9 643 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 NFATC3Q12968 1075 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 DHX8Q14562 1220 aaKnown RBP3.77□□□□□ -1.81
CD44-234ENST00000531873 ERAP2Q6P179 960 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 KLHDC10Q6PID8 442 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 ZC3H18Q86VM9 953 aaKnown RBP3.77□□□□□ -1.81
CD44-234ENST00000531873 IRF2BP1Q8IU81 584 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 HIST1H2AHQ96KK5 128 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 ZSWIM3Q96MP5 696 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 HIST1H2AJQ99878 128 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 NGRNQ9NPE2 291 aaKnown RBP3.77□□□□□ -1.81
CD44-234ENST00000531873 FNIP2Q9P278 1114 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 ARHGAP20Q9P2F6 1191 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 INTUQ9ULD6 942 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 L1RE1Q9UN81 338 aa3.77□□□□□ -1.81
CD44-234ENST00000531873 A0A1W2PR48 441 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 ABLIM1O14639 778 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 NRP2O60462 931 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 COL6A1P12109 1028 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 ATF2P15336 505 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 IL12RB1P42701 662 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 SLC6A9P48067 706 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 GLRBP48167 497 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 MGAT5Q09328 741 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 SAFB2Q14151 953 aaKnown RBP eCLIP3.76□□□□□ -1.81
CD44-234ENST00000531873 CNN3Q15417 329 aaKnown RBP3.76□□□□□ -1.81
CD44-234ENST00000531873 KCNA10Q16322 511 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 LONRF1Q17RB8 773 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 KIAA0753Q2KHM9 967 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 ANO6Q4KMQ2 910 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 FAM83BQ5T0W9 1011 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 TMEM200BQ69YZ2 307 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 CIAPIN1Q6FI81 312 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 LMBR1LQ6UX01 489 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 C11orf96Q7Z7L8 435 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 GLB1L2Q8IW92 636 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 STPG3Q8N7X2 389 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 PLBD2Q8NHP8 589 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 SMARCC2Q8TAQ2 1214 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 NSUN6Q8TEA1 469 aaKnown RBP3.76□□□□□ -1.81
CD44-234ENST00000531873 NKD2Q969F2 451 aaPredicted RBP3.76□□□□□ -1.81
CD44-234ENST00000531873 HDAC10Q969S8 669 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 EVI5LQ96CN4 794 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 DDX11Q96FC9 970 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 TMEM209Q96SK2 561 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 GORASP1Q9BQQ3 440 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 ADI1Q9BV57 179 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 APOL5Q9BWW9 433 aa3.76□□□□□ -1.81
CD44-234ENST00000531873 RBM12Q9NTZ6 932 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms