RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 TOB2Q14106 344 aaPredicted RBP8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 LY6KQ17RY6 165 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 BRDTQ58F21 947 aaPredicted RBP8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 CNKSR3Q6P9H4 555 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 BLOC1S2Q6QNY1 142 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 TMTC3Q6ZXV5 915 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 MCF2L2Q86YR7 1114 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 PRSS33Q8NF86 280 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 AFAP1L1Q8TED9 768 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 SCFD2Q8WU76 684 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 MRPL38Q96DV4 380 aaKnown RBP8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 RMDN3Q96TC7 470 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 SPZ1Q9BXG8 430 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 OSBPL7Q9BZF2 842 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 UPF3BQ9BZI7 483 aaKnown RBP8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 HDAC6Q9UBN7 1215 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 ADD3Q9UEY8 706 aaKnown RBP8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 PNMA2Q9UL42 364 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 MYO7AQ13402 2215 aa8.03□□□□□ -1.12
TRIM53CP-201ENST00000531490 ABHD14A-ACY1A0A1B0GW23 586 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 MEIS2O14770 477 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 ZBTB43O43298 467 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 SORBS3O60504 671 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 DTNBO60941 627 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 MMP3P08254 477 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 LTBRP36941 435 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 PTPN11Q06124 597 aaPredicted RBP8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 DLX2Q07687 328 aaPredicted RBP8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 TRIM71Q2Q1W2 868 aaKnown RBP8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 EPC2Q52LR7 807 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 ZNF618Q5T7W0 954 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 CCDC62Q6P9F0 684 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 USP17L6PQ6QN14 398 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 SYNE3Q6ZMZ3 975 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 SEPT14Q6ZU15 432 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 RUFY3Q7L099 469 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 MYOCDQ8IZQ8 938 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 DNERQ8NFT8 737 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 CAGE1Q8TC20 777 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 RRP36Q96EU6 259 aaKnown RBP8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 NACC1Q96RE7 527 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 ALG1Q9BT22 464 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 AGXT2Q9BYV1 514 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 BCAS3Q9H6U6 928 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 CLDND1Q9NY35 253 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 EGFL7Q9UHF1 273 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 NAP1L2Q9ULW6 460 aaPredicted RBP8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 TRIM33Q9UPN9 1127 aa8.02□□□□□ -1.13
TRIM53CP-201ENST00000531490 WDR87Q6ZQQ6 2873 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 DOCK5Q9H7D0 1870 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 ADAMTS3O15072 1205 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 EPB41L2O43491 1005 aaKnown RBP8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 KPNA6O60684 536 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 ICMTO60725 284 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 ZNF286BP0CG31 522 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 MYCLP12524 364 aaPredicted RBP8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 PSMA5P28066 241 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 PDIA3P30101 505 aaKnown RBP8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 GTF2F1P35269 517 aaKnown RBP eCLIP8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 GATA4P43694 442 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 GNAQP50148 359 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 CCT2P78371 535 aaKnown RBP8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 FGD1P98174 961 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 ATP11AP98196 1134 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 GHRHRQ02643 423 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 ARHGAP1Q07960 439 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 GPM6BQ13491 265 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 IKBKEQ14164 716 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 ARHGEF16Q5VV41 709 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 SHISA2Q6UWI4 295 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 ADHFE1Q8IWW8 467 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 FBXL16Q8N461 479 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 DTWD1Q8N5C7 304 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 C1orf127Q8N9H9 656 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 TTC16Q8NEE8 873 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 DBF4BQ8NFT6 615 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 IL31RAQ8NI17 732 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 NSUN6Q8TEA1 469 aaKnown RBP8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 PABPC5Q96DU9 382 aaKnown RBP8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 SPACA7Q96KW9 195 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 LZTS2Q9BRK4 669 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 NCOA5Q9HCD5 579 aaKnown RBP8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 PXMP2Q9NR77 195 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 FAM86C1Q9NVL1 165 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 KANSL3Q9P2N6 904 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 COL4A4P53420 1690 aaPredicted RBP8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 RIF1Q5UIP0 2472 aaKnown RBP8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 ZNF318Q5VUA4 2279 aa8.01□□□□□ -1.13
TRIM53CP-201ENST00000531490 GOLGA8AA7E2F4 631 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 GOLGA8BA8MQT2 603 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 GCOM1H8Y6P7 765 aaPredicted RBP8□□□□□ -1.13
TRIM53CP-201ENST00000531490 NKRFO15226 690 aaKnown RBP eCLIP8□□□□□ -1.13
TRIM53CP-201ENST00000531490 POLR2MP0CAP2 368 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 EVCP57679 992 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 HTRA4P83105 476 aaPredicted RBP8□□□□□ -1.13
TRIM53CP-201ENST00000531490 PDE4CQ08493 712 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 RBL2Q08999 1139 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 SUZ12Q15022 739 aaKnown RBP8□□□□□ -1.13
TRIM53CP-201ENST00000531490 PGM5Q15124 567 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 STXBP2Q15833 593 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms