RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 OXER1Q8TDS5 423 aa20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 RSPH1Q8WYR4 309 aa20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 HAS1Q92839 578 aa20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 PGBD4Q96DM1 585 aa20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 LXNQ9BS40 222 aa20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 TM6SF1Q9BZW5 370 aa20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 DHX33Q9H6R0 707 aaKnown RBP20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 DBR1Q9UK59 544 aaKnown RBP20.61■□□□□ 0.89
SSSCA1-206ENST00000531405 CCNT1O60563 726 aaKnown RBP20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 P4HBP07237 508 aaKnown RBP20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 LAMTOR4Q0VGL1 99 aa20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 GIT2Q14161 759 aa20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 ATAT1Q5SQI0 421 aa20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 UBXN11Q5T124 520 aa20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 PIK3AP1Q6ZUJ8 805 aa20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 CABP7Q86V35 215 aa20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 POTEDQ86YR6 584 aa20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 UBALD2Q8IYN6 164 aa20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 FAM177A1Q8N128 213 aaPredicted RBP20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 TDRD5Q8NAT2 981 aaKnown RBP20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 URGCPQ8TCY9 931 aa20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 PSPC1Q8WXF1 523 aaKnown RBP20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 FAM20AQ96MK3 541 aa20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 RSAD1Q9HA92 442 aa20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 RGL1Q9NZL6 768 aa20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 LIMD1Q9UGP4 676 aa20.6■□□□□ 0.89
SSSCA1-206ENST00000531405 ZBTB39O15060 712 aa20.59■□□□□ 0.89
SSSCA1-206ENST00000531405 EPB41L2O43491 1005 aaKnown RBP20.59■□□□□ 0.89
SSSCA1-206ENST00000531405 POMCP01189 267 aa20.59■□□□□ 0.89
SSSCA1-206ENST00000531405 HOXA11P31270 313 aaPredicted RBP20.59■□□□□ 0.89
SSSCA1-206ENST00000531405 EMC2Q15006 297 aa20.59■□□□□ 0.89
SSSCA1-206ENST00000531405 EARS2Q5JPH6 523 aaKnown RBP20.59■□□□□ 0.89
SSSCA1-206ENST00000531405 NCAPH2Q6IBW4 605 aa20.59■□□□□ 0.89
SSSCA1-206ENST00000531405 PPP4R3AQ6IN85 833 aa20.59■□□□□ 0.89
SSSCA1-206ENST00000531405 SRGAP1Q7Z6B7 1085 aa20.59■□□□□ 0.89
SSSCA1-206ENST00000531405 MRPL10Q7Z7H8 261 aaKnown RBP20.59■□□□□ 0.89
SSSCA1-206ENST00000531405 DOCK8Q8NF50 2099 aa20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 CARNS1A5YM72 827 aa20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 FAM205CA6NFA0 338 aa20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 H0Y858 1186 aa20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 DKC1O60832 514 aaKnown RBP eCLIP20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 GCFC2P16383 781 aaKnown RBP20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 YWHABP31946 246 aaKnown RBP20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 RFC5P40937 340 aa20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 CYP4A11Q02928 519 aa20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 CTTNQ14247 550 aaKnown RBP20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 ZDHHC14Q8IZN3 488 aa20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 RNF149Q8NC42 400 aa20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 ATOH1Q92858 354 aaPredicted RBP20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 DYDC2Q96IM9 177 aa20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 KLHL5Q96PQ7 755 aa20.58■□□□□ 0.89
SSSCA1-206ENST00000531405 SPDYE4A6NLX3 237 aa20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 MARCH6O60337 910 aa20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 CNPP09543 421 aaKnown RBP20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 KLRC2P26717 231 aa20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 CLCN4P51793 760 aa20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 EPHA7Q15375 998 aa20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 XKR9Q5GH70 373 aa20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 FERMT3Q86UX7 667 aa20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 C4orf19Q8IY42 314 aa20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 SMG8Q8ND04 991 aaKnown RBP20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 DOCK6Q96HP0 2047 aa20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 FAM193BQ96PV7 902 aaPredicted RBP20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 SFXN1Q9H9B4 322 aa20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 FAN1Q9Y2M0 1017 aa20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 SPTBN4Q9H254 2564 aa20.57■□□□□ 0.88
SSSCA1-206ENST00000531405 STK36Q9NRP7 1315 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 CNTNAP2Q9UHC6 1331 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 C2CD2LO14523 706 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 NRP1O14786 923 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 TBX3O15119 743 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 CDKL5O76039 1030 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 SPIRE1Q08AE8 756 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 PPFIBP1Q86W92 1011 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 EXOC8Q8IYI6 725 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 TMEM105Q8N8V8 129 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 TMEM175Q9BSA9 504 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 EMILIN2Q9BXX0 1053 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 EIF2AQ9BY44 585 aaKnown RBP20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 TPCN1Q9ULQ1 816 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 PRG3Q9Y2Y8 225 aaPredicted RBP20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 PPME1Q9Y570 386 aa20.56■□□□□ 0.88
SSSCA1-206ENST00000531405 LILRB3O75022 631 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 CTDNEP1O95476 244 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 ALDH2P05091 517 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 XBP1P17861 261 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 NCLP19338 710 aaKnown RBP20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 OTUD6AQ7L8S5 288 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 TAS1R1Q7RTX1 841 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 GPR149Q86SP6 731 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 TPH2Q8IWU9 490 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 PLCD3Q8N3E9 789 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 TCP11Q8WWU5 503 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 CPB2Q96IY4 423 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 MTRQ99707 1265 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 RNF39Q9H2S5 420 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 XPNPEP1Q9NQW7 623 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 MARCH5Q9NX47 278 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 KANSL3Q9P2N6 904 aa20.55■□□□□ 0.88
SSSCA1-206ENST00000531405 USTQ9Y2C2 406 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms