RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 BBOX1O75936 387 aa15.54■□□□□ 0.08
LRRK1-207ENST00000531270 GTF2H3Q13889 308 aa15.54■□□□□ 0.08
LRRK1-207ENST00000531270 LRRC14Q15048 493 aa15.54■□□□□ 0.08
LRRK1-207ENST00000531270 ZBED8Q8IZ13 594 aa15.54■□□□□ 0.08
LRRK1-207ENST00000531270 SRP68Q9UHB9 627 aaKnown RBP15.54■□□□□ 0.08
LRRK1-207ENST00000531270 ASXL2Q76L83 1435 aa15.54■□□□□ 0.08
LRRK1-207ENST00000531270 IKBKBO14920 756 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 HMBSP08397 361 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 MAP4P27816 1152 aaKnown RBP15.53■□□□□ 0.08
LRRK1-207ENST00000531270 GRIK1P39086 918 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 GFPT1Q06210 699 aaPredicted RBP15.53■□□□□ 0.08
LRRK1-207ENST00000531270 KIAA2013Q8IYS2 634 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 RAD18Q9NS91 495 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 STAP1Q9ULZ2 295 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 SSH2Q76I76 1423 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 CCDC78A2IDD5 438 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 MYO1GB0I1T2 1018 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 PODXLO00592 558 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 MRPS15P82914 257 aaKnown RBP15.53■□□□□ 0.08
LRRK1-207ENST00000531270 MRPL40Q9NQ50 206 aaKnown RBP15.53■□□□□ 0.08
LRRK1-207ENST00000531270 ZSWIM5Q9P217 1185 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 MAD2L2Q9UI95 211 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 ADCY3O60266 1144 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 SF3B3Q15393 1217 aaKnown RBP15.53■□□□□ 0.08
LRRK1-207ENST00000531270 BTNL9Q6UXG8 535 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 PRPF3O43395 683 aaKnown RBP15.53■□□□□ 0.08
LRRK1-207ENST00000531270 CALB1P05937 261 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 IRF1P10914 325 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 PSMC5P62195 406 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 GPC5P78333 572 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 VEPH1Q14D04 833 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 TTC13Q8NBP0 860 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 ICA1LQ8NDH6 482 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 WRNIP1Q96S55 665 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 RGS12O14924 1447 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 NUP160Q12769 1436 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 POTEMA6NI47 508 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 ZNF500O60304 480 aaPredicted RBP15.53■□□□□ 0.08
LRRK1-207ENST00000531270 SWSAP1Q6NVH7 229 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 PADI6Q6TGC4 694 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 COG1Q8WTW3 980 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 TJP2Q9UDY2 1190 aa15.53■□□□□ 0.08
LRRK1-207ENST00000531270 COL17A1Q9UMD9 1497 aaPredicted RBP15.52■□□□□ 0.08
LRRK1-207ENST00000531270 FAM196BA6NMK8 535 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 BRD2P25440 801 aaKnown RBP15.52■□□□□ 0.08
LRRK1-207ENST00000531270 TRPC1P48995 793 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 PRELPP51888 382 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 MED21Q13503 144 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 LVRNQ6Q4G3 990 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.52■□□□□ 0.08
LRRK1-207ENST00000531270 LRRC53A6NM62 1247 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 USP17L5A8MUK1 530 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 SASH1O94885 1247 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 GNA15P30679 374 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 AP2B1P63010 937 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 CYTH1Q15438 398 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 C11orf96Q7Z7L8 435 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 SAAL1Q96ER3 474 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.52■□□□□ 0.08
LRRK1-207ENST00000531270 TRIM49BA6NDI0 452 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 CIAO1O76071 339 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 RALAP11233 206 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 HMOX2P30519 316 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 ARFIP2P53365 341 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 CYFIP1Q7L576 1253 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 VSTM4Q8IW00 320 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 APPL2Q8NEU8 664 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 ZNF564Q8TBZ8 553 aaPredicted RBP15.52■□□□□ 0.08
LRRK1-207ENST00000531270 INPP5DQ92835 1189 aa15.52■□□□□ 0.08
LRRK1-207ENST00000531270 GUCA1CO95843 209 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 GFAPP14136 432 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 AKT1P31749 480 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 MAGOHP61326 146 aaKnown RBP15.52■□□□□ 0.07
LRRK1-207ENST00000531270 LRRC63Q05C16 580 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 FAM102AQ5T9C2 384 aaPredicted RBP15.52■□□□□ 0.07
LRRK1-207ENST00000531270 MAP4K1Q92918 833 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 MMP19Q99542 508 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 ARHGAP26Q9UNA1 814 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 ATP11BQ9Y2G3 1177 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 DAB1O75553 588 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 ZFXP17010 805 aaPredicted RBP15.52■□□□□ 0.07
LRRK1-207ENST00000531270 SLC9A1P19634 815 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 MEI1Q5TIA1 1274 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 ITPRIPL1Q6GPH6 555 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 MMS22LQ6ZRQ5 1243 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 LINC00301Q8NCQ3 95 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 SH3RF3Q8TEJ3 882 aaPredicted RBP15.52■□□□□ 0.07
LRRK1-207ENST00000531270 CPVLQ9H3G5 476 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 SLC24A3Q9HC58 644 aa15.52■□□□□ 0.07
LRRK1-207ENST00000531270 SRPRBQ9Y5M8 271 aaKnown RBP15.52■□□□□ 0.07
LRRK1-207ENST00000531270 BLMP54132 1417 aaPredicted RBP15.51■□□□□ 0.07
LRRK1-207ENST00000531270 SYCP2Q9BX26 1530 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 TYK2P29597 1187 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 CLCN6P51797 869 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 PMS2P54278 862 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 UNC5CLQ8IV45 518 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 FAM167AQ96KS9 214 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 GCOM2Q9BZD3 368 aaPredicted RBP15.51■□□□□ 0.07
LRRK1-207ENST00000531270 ZNF711Q9Y462 761 aa15.51■□□□□ 0.07
LRRK1-207ENST00000531270 NR3C1P04150 777 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms