RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 DLX2Q07687 328 aaPredicted RBP14.77□□□□□ -0.05
VPS28-211ENST00000530790 PTGDRQ13258 359 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 ADAM15Q13444 863 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 MAEAQ7L5Y9 396 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 FAM178BQ8IXR5 827 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 SLC39A11Q8N1S5 342 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 CNNM3Q8NE01 707 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 TMEM169Q96HH4 297 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 CDCA3Q99618 268 aaPredicted RBP14.77□□□□□ -0.05
VPS28-211ENST00000530790 RSAD1Q9HA92 442 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 NGRNQ9NPE2 291 aaKnown RBP14.77□□□□□ -0.05
VPS28-211ENST00000530790 GPRC5CQ9NQ84 441 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 TBC1D13Q9NVG8 400 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 LRWD1Q9UFC0 647 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 CD207Q9UJ71 328 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 SMC3Q9UQE7 1217 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 PCDHB6Q9Y5E3 794 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 STK24Q9Y6E0 443 aa14.77□□□□□ -0.05
VPS28-211ENST00000530790 OFD1O75665 1012 aa14.76□□□□□ -0.05
VPS28-211ENST00000530790 SRGAP2BP0DMP2 458 aa14.76□□□□□ -0.05
VPS28-211ENST00000530790 NCLP19338 710 aaKnown RBP14.76□□□□□ -0.05
VPS28-211ENST00000530790 SSTR3P32745 418 aaPredicted RBP14.76□□□□□ -0.05
VPS28-211ENST00000530790 SMAD4Q13485 552 aaKnown RBP14.76□□□□□ -0.05
VPS28-211ENST00000530790 RILPL1Q5EBL4 403 aa14.76□□□□□ -0.05
VPS28-211ENST00000530790 UBXN11Q5T124 520 aa14.76□□□□□ -0.05
VPS28-211ENST00000530790 PADI6Q6TGC4 694 aa14.76□□□□□ -0.05
VPS28-211ENST00000530790 AGMOQ6ZNB7 445 aa14.76□□□□□ -0.05
VPS28-211ENST00000530790 TMC7Q7Z402 723 aa14.76□□□□□ -0.05
VPS28-211ENST00000530790 ZBTB8OSQ8IWT0 167 aa14.76□□□□□ -0.05
VPS28-211ENST00000530790 C4orf32Q8N8J7 132 aa14.76□□□□□ -0.05
VPS28-211ENST00000530790 SNX29Q8TEQ0 813 aa14.76□□□□□ -0.05
VPS28-211ENST00000530790 CPB2Q96IY4 423 aa14.76□□□□□ -0.05
VPS28-211ENST00000530790 TRIM6Q9C030 488 aaPredicted RBP14.76□□□□□ -0.05
VPS28-211ENST00000530790 GBP3Q9H0R5 595 aa14.76□□□□□ -0.05
VPS28-211ENST00000530790 CSRNP2Q9H175 543 aa14.76□□□□□ -0.05
VPS28-211ENST00000530790 BARX2Q9UMQ3 279 aaPredicted RBP14.76□□□□□ -0.05
VPS28-211ENST00000530790 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.76□□□□□ -0.05
VPS28-211ENST00000530790 NT5C1B-RDH14C9J2C7 533 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 PER2O15055 1255 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 MBTPS2O43462 519 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 GLP2RO95838 553 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 ITGA4P13612 1032 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 CA8P35219 290 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 PRPHP41219 470 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 SMC1AQ14683 1233 aaKnown RBP14.75□□□□□ -0.05
VPS28-211ENST00000530790 BMS1Q14692 1282 aaKnown RBP14.75□□□□□ -0.05
VPS28-211ENST00000530790 DUSP6Q16828 381 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 CDCA2Q69YH5 1023 aaPredicted RBP14.75□□□□□ -0.05
VPS28-211ENST00000530790 MRPL10Q7Z7H8 261 aaKnown RBP14.75□□□□□ -0.05
VPS28-211ENST00000530790 HACE1Q8IYU2 909 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 IGSF22Q8N9C0 903 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 MSLNLQ96KJ4 702 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 C2orf40Q9H1Z8 148 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 NRDE2Q9H7Z3 1164 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 UBN1Q9NPG3 1134 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 KANSL3Q9P2N6 904 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 PRKAG3Q9UGI9 489 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 IPPQ9Y573 584 aa14.75□□□□□ -0.05
VPS28-211ENST00000530790 B4GALT5O43286 388 aa14.74□□□□□ -0.05
VPS28-211ENST00000530790 ARF4P18085 180 aaPredicted RBP14.74□□□□□ -0.05
VPS28-211ENST00000530790 CYP11B2P19099 503 aa14.74□□□□□ -0.05
VPS28-211ENST00000530790 PDIA5Q14554 519 aa14.74□□□□□ -0.05
VPS28-211ENST00000530790 SMAD2Q15796 467 aaKnown RBP14.74□□□□□ -0.05
VPS28-211ENST00000530790 AMHR2Q16671 573 aa14.74□□□□□ -0.05
VPS28-211ENST00000530790 KRT79Q5XKE5 535 aa14.74□□□□□ -0.05
VPS28-211ENST00000530790 DTHD1Q6ZMT9 781 aa14.74□□□□□ -0.05
VPS28-211ENST00000530790 GJD3Q8N144 294 aa14.74□□□□□ -0.05
VPS28-211ENST00000530790 SMRP1Q8NCR6 262 aa14.74□□□□□ -0.05
VPS28-211ENST00000530790 SMG8Q8ND04 991 aaKnown RBP14.74□□□□□ -0.05
VPS28-211ENST00000530790 PRIMPOLQ96LW4 560 aa14.74□□□□□ -0.05
VPS28-211ENST00000530790 FAM193BQ96PV7 902 aaPredicted RBP14.74□□□□□ -0.05
VPS28-211ENST00000530790 POP1Q99575 1024 aaKnown RBP14.74□□□□□ -0.05
VPS28-211ENST00000530790 EIF2AQ9BY44 585 aaKnown RBP14.74□□□□□ -0.05
VPS28-211ENST00000530790 BHMT2Q9H2M3 363 aa14.74□□□□□ -0.05
VPS28-211ENST00000530790 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.74□□□□□ -0.05
VPS28-211ENST00000530790 DDX19AQ9NUU7 478 aaKnown RBP14.74□□□□□ -0.05
VPS28-211ENST00000530790 PRMT7Q9NVM4 692 aaPredicted RBP14.74□□□□□ -0.05
VPS28-211ENST00000530790 CLEC1BQ9P126 229 aa14.74□□□□□ -0.05
VPS28-211ENST00000530790 MYO7AQ13402 2215 aa14.74□□□□□ -0.05
VPS28-211ENST00000530790 HIDE1A8MVS5 230 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 POMCP01189 267 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 MLH1P40692 756 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 NAMPTP43490 491 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 SLC11A1P49279 550 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 ZP2Q05996 745 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 COASYQ13057 564 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 PPP2R5AQ15172 486 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 TMEM132AQ24JP5 1023 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 SLC27A1Q6PCB7 646 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 PPP4R3CPQ6ZMV5 832 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 TMEM173Q86WV6 379 aaPredicted RBP14.73□□□□□ -0.05
VPS28-211ENST00000530790 ADHFE1Q8IWW8 467 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 VPS52Q8N1B4 723 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 DEPTORQ8TB45 409 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 IGSF21Q96ID5 467 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 APOL6Q9BWW8 343 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 NXF3Q9H4D5 531 aaKnown RBP14.73□□□□□ -0.05
VPS28-211ENST00000530790 CD320Q9NPF0 282 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 DNAJB4Q9UDY4 337 aa14.73□□□□□ -0.05
VPS28-211ENST00000530790 KIAA1024Q9UPX6 916 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms