RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 KCNG1Q9UIX4 513 aa23.5■■□□□ 1.35
CAPN1-220ENST00000530567 PIN4Q9Y237 131 aaKnown RBP23.5■■□□□ 1.35
CAPN1-220ENST00000530567 DENND3A2RUS2 1198 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 ZBBXA8MT70 800 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 K7ENM7 598 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 ERLIN2O94905 339 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 MYL1P05976 194 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 ARF4P18085 180 aaPredicted RBP23.49■■□□□ 1.35
CAPN1-220ENST00000530567 NMT1P30419 496 aaKnown RBP23.49■■□□□ 1.35
CAPN1-220ENST00000530567 DPYDQ12882 1025 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 HAUS6Q7Z4H7 955 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 PRIMPOLQ96LW4 560 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 ST6GALNAC4Q9H4F1 302 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 CHST12Q9NRB3 414 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 RGS18Q9NS28 235 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 DACT1Q9NYF0 836 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 USP20Q9Y2K6 914 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 TTC3P53804 2025 aa23.49■■□□□ 1.35
CAPN1-220ENST00000530567 K7ERI5 159 aa23.48■■□□□ 1.35
CAPN1-220ENST00000530567 ACKR2O00590 384 aa23.48■■□□□ 1.35
CAPN1-220ENST00000530567 PPP1R37O75864 691 aa23.48■■□□□ 1.35
CAPN1-220ENST00000530567 HERC4Q5GLZ8 1057 aaPredicted RBP23.48■■□□□ 1.35
CAPN1-220ENST00000530567 HPS3Q969F9 1004 aa23.48■■□□□ 1.35
CAPN1-220ENST00000530567 CPB2Q96IY4 423 aa23.48■■□□□ 1.35
CAPN1-220ENST00000530567 STRA6Q9BX79 667 aa23.48■■□□□ 1.35
CAPN1-220ENST00000530567 TBC1D7Q9P0N9 293 aa23.48■■□□□ 1.35
CAPN1-220ENST00000530567 PVALEFA0A1B0GWK0 134 aa23.47■■□□□ 1.35
CAPN1-220ENST00000530567 C9IYK1 514 aa23.47■■□□□ 1.35
CAPN1-220ENST00000530567 CASP5P51878 434 aa23.47■■□□□ 1.35
CAPN1-220ENST00000530567 POSTNQ15063 836 aa23.47■■□□□ 1.35
CAPN1-220ENST00000530567 NT5DC1Q5TFE4 455 aa23.47■■□□□ 1.35
CAPN1-220ENST00000530567 KANK3Q6NY19 840 aa23.47■■□□□ 1.35
CAPN1-220ENST00000530567 ZNF720Q7Z2F6 126 aa23.47■■□□□ 1.35
CAPN1-220ENST00000530567 CRIPAKQ8N1N5 446 aa23.47■■□□□ 1.35
CAPN1-220ENST00000530567 GLIS3Q8NEA6 775 aa23.47■■□□□ 1.35
CAPN1-220ENST00000530567 MTIF3Q9H2K0 278 aaKnown RBP23.47■■□□□ 1.35
CAPN1-220ENST00000530567 TRIOBPQ9H2D6 2365 aa23.46■■□□□ 1.35
CAPN1-220ENST00000530567 H0YCG3 227 aa23.46■■□□□ 1.35
CAPN1-220ENST00000530567 KINO60870 393 aaKnown RBP23.46■■□□□ 1.35
CAPN1-220ENST00000530567 AXLP30530 894 aa23.46■■□□□ 1.35
CAPN1-220ENST00000530567 GTF2BQ00403 316 aa23.46■■□□□ 1.35
CAPN1-220ENST00000530567 PRPF4BQ13523 1007 aaKnown RBP23.46■■□□□ 1.35
CAPN1-220ENST00000530567 ZC2HC1CQ53FD0 456 aaPredicted RBP23.46■■□□□ 1.35
CAPN1-220ENST00000530567 UBXN11Q5T124 520 aa23.46■■□□□ 1.35
CAPN1-220ENST00000530567 FAM109BQ6ICB4 259 aaPredicted RBP23.46■■□□□ 1.35
CAPN1-220ENST00000530567 TRAIPQ9BWF2 469 aa23.46■■□□□ 1.35
CAPN1-220ENST00000530567 MRPL44Q9H9J2 332 aaKnown RBP23.46■■□□□ 1.35
CAPN1-220ENST00000530567 SLC4A7Q9Y6M7 1214 aa23.46■■□□□ 1.35
CAPN1-220ENST00000530567 LAMA3Q16787 3333 aa23.46■■□□□ 1.35
CAPN1-220ENST00000530567 A0A1B0GUA9 196 aa23.45■■□□□ 1.34
CAPN1-220ENST00000530567 A0A1W2PPC1 479 aa23.45■■□□□ 1.34
CAPN1-220ENST00000530567 KCNJ6P48051 423 aa23.45■■□□□ 1.34
CAPN1-220ENST00000530567 PNOCQ13519 176 aa23.45■■□□□ 1.34
CAPN1-220ENST00000530567 NOTUMQ6P988 496 aa23.45■■□□□ 1.34
CAPN1-220ENST00000530567 SLC24A5Q71RS6 500 aa23.45■■□□□ 1.34
CAPN1-220ENST00000530567 TMCO2Q7Z6W1 182 aaPredicted RBP23.45■■□□□ 1.34
CAPN1-220ENST00000530567 ELOA2Q8IYF1 753 aaPredicted RBP23.45■■□□□ 1.34
CAPN1-220ENST00000530567 SLC17A8Q8NDX2 589 aa23.45■■□□□ 1.34
CAPN1-220ENST00000530567 C1orf112Q9NSG2 853 aa23.45■■□□□ 1.34
CAPN1-220ENST00000530567 TBX20Q9UMR3 447 aa23.45■■□□□ 1.34
CAPN1-220ENST00000530567 LAMA2P24043 3122 aaKnown RBP23.45■■□□□ 1.34
CAPN1-220ENST00000530567 GOLGA6L22H0YM25 854 aa23.44■■□□□ 1.34
CAPN1-220ENST00000530567 AMHP03971 560 aa23.44■■□□□ 1.34
CAPN1-220ENST00000530567 RPN1P04843 607 aaKnown RBP23.44■■□□□ 1.34
CAPN1-220ENST00000530567 MYBP10242 640 aa23.44■■□□□ 1.34
CAPN1-220ENST00000530567 ZSCAN20P17040 1043 aaPredicted RBP23.44■■□□□ 1.34
CAPN1-220ENST00000530567 SCP2P22307 547 aa23.44■■□□□ 1.34
CAPN1-220ENST00000530567 FAM189BP81408 668 aa23.44■■□□□ 1.34
CAPN1-220ENST00000530567 KMT5BQ4FZB7 885 aa23.44■■□□□ 1.34
CAPN1-220ENST00000530567 FAM26FQ5R3K3 315 aa23.44■■□□□ 1.34
CAPN1-220ENST00000530567 TWF2Q6IBS0 349 aaKnown RBP23.44■■□□□ 1.34
CAPN1-220ENST00000530567 CDR2LQ86X02 465 aaPredicted RBP23.44■■□□□ 1.34
CAPN1-220ENST00000530567 MYOCDQ8IZQ8 938 aa23.44■■□□□ 1.34
CAPN1-220ENST00000530567 CCDC51Q96ER9 411 aa23.44■■□□□ 1.34
CAPN1-220ENST00000530567 SLC9A7Q96T83 725 aa23.44■■□□□ 1.34
CAPN1-220ENST00000530567 TARS2Q9BW92 718 aaKnown RBP23.44■■□□□ 1.34
CAPN1-220ENST00000530567 PDZD7Q9H5P4 517 aa23.44■■□□□ 1.34
CAPN1-220ENST00000530567 COL4A6Q14031 1691 aa23.44■■□□□ 1.34
CAPN1-220ENST00000530567 ATP2A2P16615 1042 aaKnown RBP23.43■■□□□ 1.34
CAPN1-220ENST00000530567 ATF7P17544 494 aaPredicted RBP23.43■■□□□ 1.34
CAPN1-220ENST00000530567 SARSP49591 514 aaKnown RBP23.43■■□□□ 1.34
CAPN1-220ENST00000530567 EEF1DP3Q658K8 133 aa23.43■■□□□ 1.34
CAPN1-220ENST00000530567 MAP4K3Q8IVH8 894 aa23.43■■□□□ 1.34
CAPN1-220ENST00000530567 GPT2Q8TD30 523 aa23.43■■□□□ 1.34
CAPN1-220ENST00000530567 ERCC4Q92889 916 aaPredicted RBP23.43■■□□□ 1.34
CAPN1-220ENST00000530567 CCDC34Q96HJ3 373 aa23.43■■□□□ 1.34
CAPN1-220ENST00000530567 ACO2Q99798 780 aaKnown RBP23.43■■□□□ 1.34
CAPN1-220ENST00000530567 EIF2AQ9BY44 585 aaKnown RBP23.43■■□□□ 1.34
CAPN1-220ENST00000530567 MRPL4Q9BYD3 311 aaKnown RBP23.43■■□□□ 1.34
CAPN1-220ENST00000530567 A0A0U1RQF3 1178 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 ABLIM1O14639 778 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 GCNT3O95395 438 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 MCM4P33991 863 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 KCNA1Q09470 495 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 ATF7IP2Q5U623 682 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 EPM2AIP1Q7L775 607 aaPredicted RBP23.42■■□□□ 1.34
CAPN1-220ENST00000530567 ZNF598Q86UK7 904 aaKnown RBP23.42■■□□□ 1.34
CAPN1-220ENST00000530567 ECHDC2Q86YB7 292 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 SPATA20Q8TB22 786 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 PHOSPHO2Q8TCD6 241 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms