RNA–Protein interactions for RNA: ENST00000530426.1

LTBP3-216, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-216ENST00000530426 LIG4P49917 911 aa16.85■□□□□ 0.29
LTBP3-216ENST00000530426 NFX1Q12986 1120 aaKnown RBP16.85■□□□□ 0.29
LTBP3-216ENST00000530426 PAK1Q13153 545 aa16.85■□□□□ 0.29
LTBP3-216ENST00000530426 BMT2Q1RMZ1 405 aa16.85■□□□□ 0.29
LTBP3-216ENST00000530426 COBLL1Q53SF7 1204 aa16.85■□□□□ 0.29
LTBP3-216ENST00000530426 TAS1R3Q7RTX0 852 aa16.85■□□□□ 0.29
LTBP3-216ENST00000530426 TMEM40Q8WWA1 233 aa16.85■□□□□ 0.29
LTBP3-216ENST00000530426 P2RX5Q93086 422 aa16.85■□□□□ 0.29
LTBP3-216ENST00000530426 NOC4LQ9BVI4 516 aaKnown RBP16.85■□□□□ 0.29
LTBP3-216ENST00000530426 MRPL4Q9BYD3 311 aaKnown RBP16.85■□□□□ 0.29
LTBP3-216ENST00000530426 CCDC113Q9H0I3 377 aa16.85■□□□□ 0.29
LTBP3-216ENST00000530426 FZD8Q9H461 694 aa16.85■□□□□ 0.29
LTBP3-216ENST00000530426 NOC2LQ9Y3T9 749 aaKnown RBP16.85■□□□□ 0.29
LTBP3-216ENST00000530426 HTTP42858 3142 aa16.85■□□□□ 0.29
LTBP3-216ENST00000530426 ACKR2O00590 384 aa16.84■□□□□ 0.29
LTBP3-216ENST00000530426 HNRNPDLO14979 420 aaKnown RBP16.84■□□□□ 0.29
LTBP3-216ENST00000530426 CCNE1P24864 410 aa16.84■□□□□ 0.29
LTBP3-216ENST00000530426 CCL23P55773 120 aa16.84■□□□□ 0.29
LTBP3-216ENST00000530426 TPD52L1Q16890 204 aaPredicted RBP16.84■□□□□ 0.29
LTBP3-216ENST00000530426 HS2ST1Q7LGA3 356 aa16.84■□□□□ 0.29
LTBP3-216ENST00000530426 MAP4K3Q8IVH8 894 aa16.84■□□□□ 0.29
LTBP3-216ENST00000530426 HTATIP2Q9BUP3 242 aa16.84■□□□□ 0.29
LTBP3-216ENST00000530426 TARS2Q9BW92 718 aaKnown RBP16.84■□□□□ 0.29
LTBP3-216ENST00000530426 GBP3Q9H0R5 595 aa16.84■□□□□ 0.29
LTBP3-216ENST00000530426 IKZF4Q9H2S9 585 aa16.84■□□□□ 0.29
LTBP3-216ENST00000530426 UMODL1Q5DID0 1318 aa16.84■□□□□ 0.29
LTBP3-216ENST00000530426 BICDL2A1A5D9 508 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 TRIM49BA6NDI0 452 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 GPR182O15218 404 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 B4GALT5O43286 388 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 IQCF3P0C7M6 154 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 ERCC5P28715 1186 aaPredicted RBP16.83■□□□□ 0.28
LTBP3-216ENST00000530426 CYP2C18P33260 490 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 HOXD13P35453 343 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 RBL2Q08999 1139 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 PAK2Q13177 524 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 CT47A1Q5JQC4 288 aaPredicted RBP16.83■□□□□ 0.28
LTBP3-216ENST00000530426 FBXO47Q5MNV8 452 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 ANKRD40Q6AI12 368 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 PPP4R3CPQ6ZMV5 832 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 C7orf61Q8IZ16 206 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 NOC3LQ8WTT2 800 aaKnown RBP16.83■□□□□ 0.28
LTBP3-216ENST00000530426 CPB2Q96IY4 423 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 PRIMPOLQ96LW4 560 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 TCHPQ9BT92 498 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 SEMA6BQ9H3T3 888 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 TYW1Q9NV66 732 aaKnown RBP16.83■□□□□ 0.28
LTBP3-216ENST00000530426 PRKAG2Q9UGJ0 569 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 RWDD2AQ9UIY3 292 aa16.83■□□□□ 0.28
LTBP3-216ENST00000530426 ZMYM2Q9UBW7 1377 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 ANKRD63C9JTQ0 380 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 TULP1O00294 542 aaPredicted RBP16.82■□□□□ 0.28
LTBP3-216ENST00000530426 CLIC2O15247 247 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 TSPAN1O60635 241 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 EDN1P05305 212 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 HARSP12081 509 aaKnown RBP16.82■□□□□ 0.28
LTBP3-216ENST00000530426 RAG1P15918 1043 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 CD52P31358 61 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 ZNF165P49910 485 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 LPIN1Q14693 890 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 PCBP1Q15365 356 aaKnown RBP eCLIP16.82■□□□□ 0.28
LTBP3-216ENST00000530426 FAM187BQ17R55 369 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 ATF7IP2Q5U623 682 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 ARMCX5Q6P1M9 558 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 TRAF7Q6Q0C0 670 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 TSHZ1Q6ZSZ6 1077 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 ZBTB33Q86T24 672 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 FAM228AQ86W67 206 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 USP38Q8NB14 1042 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 GOLGA5Q8TBA6 731 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 KCNN1Q92952 543 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 SCLYQ96I15 445 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 KCTD10Q9H3F6 313 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 ANKFY1Q9P2R3 1169 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 TBX21Q9UL17 535 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 ST3GAL5Q9UNP4 418 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 SIP14410 1827 aa16.82■□□□□ 0.28
LTBP3-216ENST00000530426 CNTNAP2Q9UHC6 1331 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 TTLL13PA6NNM8 815 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 BECN2A8MW95 431 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 TISP43B9A030 160 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 RBAK-RBAKDNI3L0D1 243 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 PDXKO00764 312 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 TGFB1I1O43294 461 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 ARF4P18085 180 aaPredicted RBP16.81■□□□□ 0.28
LTBP3-216ENST00000530426 PMS1P54277 932 aaKnown RBP16.81■□□□□ 0.28
LTBP3-216ENST00000530426 AMHR2Q16671 573 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 CENPPQ6IPU0 288 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 ZPBP2Q6X784 338 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 CDR2LQ86X02 465 aaPredicted RBP16.81■□□□□ 0.28
LTBP3-216ENST00000530426 AOPEPQ8N6M6 819 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 POMGNT1Q8WZA1 660 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 DPF3Q92784 378 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 ACO2Q99798 780 aaKnown RBP16.81■□□□□ 0.28
LTBP3-216ENST00000530426 OSBPL7Q9BZF2 842 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 PCIF1Q9H4Z3 704 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 AGO3Q9H9G7 860 aaKnown RBP16.81■□□□□ 0.28
LTBP3-216ENST00000530426 AGPAT3Q9NRZ7 376 aa16.81■□□□□ 0.28
LTBP3-216ENST00000530426 PIN4Q9Y237 131 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms