RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 GJD2Q9UKL4 321 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 KNSTRNQ9Y448 316 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 PCDHA11Q9Y5I1 949 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 SNX11Q9Y5W9 270 aa8.52□□□□□ -1.05
SVIP-204ENST00000530199 TRBV23OR9-2A0A075B6M9 112 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 ANXA1P04083 346 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 ITGB2P05107 769 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 H2AFB1P0C5Y9 115 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 H2AFB2P0C5Z0 115 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 ENDOUP21128 410 aaKnown RBP8.51□□□□□ -1.05
SVIP-204ENST00000530199 EXOSC10Q01780 885 aaKnown RBP8.51□□□□□ -1.05
SVIP-204ENST00000530199 FAM110CQ1W6H9 321 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 PIK3R6Q5UE93 754 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 DDX53Q86TM3 631 aaKnown RBP8.51□□□□□ -1.05
SVIP-204ENST00000530199 PLBD2Q8NHP8 589 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 TRIB2Q92519 343 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 HOOK2Q96ED9 719 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 CEP89Q96ST8 783 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 ORAI3Q9BRQ5 295 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 CDADC1Q9BWV3 514 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 SENP6Q9GZR1 1112 aaPredicted RBP8.51□□□□□ -1.05
SVIP-204ENST00000530199 PRDM12Q9H4Q4 367 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 CD209Q9NNX6 404 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 STK17AQ9UEE5 414 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 CACNA1BQ00975 2339 aa8.51□□□□□ -1.05
SVIP-204ENST00000530199 RPAP1Q9BWH6 1393 aaPredicted RBP8.5□□□□□ -1.05
SVIP-204ENST00000530199 CHD7Q9P2D1 2997 aa8.5□□□□□ -1.05
SVIP-204ENST00000530199 DCHS1Q96JQ0 3298 aa8.5□□□□□ -1.05
SVIP-204ENST00000530199 TMEM82A0PJX8 343 aa8.5□□□□□ -1.05
SVIP-204ENST00000530199 CYP26A1O43174 497 aa8.5□□□□□ -1.05
SVIP-204ENST00000530199 GSK3AP49840 483 aa8.5□□□□□ -1.05
SVIP-204ENST00000530199 RTP1P59025 263 aa8.5□□□□□ -1.05
SVIP-204ENST00000530199 TFF2Q03403 129 aa8.5□□□□□ -1.05
SVIP-204ENST00000530199 KCNMA1Q12791 1236 aa8.5□□□□□ -1.05
SVIP-204ENST00000530199 AIMP1Q12904 312 aaKnown RBP8.5□□□□□ -1.05
SVIP-204ENST00000530199 INF2Q27J81 1249 aa8.5□□□□□ -1.05
SVIP-204ENST00000530199 MBLAC2Q68D91 279 aa8.5□□□□□ -1.05
SVIP-204ENST00000530199 FASTKD5Q7L8L6 764 aaKnown RBP8.5□□□□□ -1.05
SVIP-204ENST00000530199 CREG2Q8IUH2 290 aa8.5□□□□□ -1.05
SVIP-204ENST00000530199 ZC3H7AQ8IWR0 971 aaKnown RBP8.5□□□□□ -1.05
SVIP-204ENST00000530199 PCDH19Q8TAB3 1148 aa8.5□□□□□ -1.05
SVIP-204ENST00000530199 CDC5LQ99459 802 aaKnown RBP8.5□□□□□ -1.05
SVIP-204ENST00000530199 ALG1Q9BT22 464 aa8.5□□□□□ -1.05
SVIP-204ENST00000530199 TDRD3Q9H7E2 651 aaKnown RBP8.5□□□□□ -1.05
SVIP-204ENST00000530199 CACNA1GO43497 2377 aa8.49□□□□□ -1.05
SVIP-204ENST00000530199 TCP10L2B9ZVM9 353 aa8.49□□□□□ -1.05
SVIP-204ENST00000530199 F8W031 263 aaPredicted RBP8.49□□□□□ -1.05
SVIP-204ENST00000530199 ESR1P03372 595 aa8.49□□□□□ -1.05
SVIP-204ENST00000530199 RBM5P52756 815 aaKnown RBP eCLIP8.49□□□□□ -1.05
SVIP-204ENST00000530199 TEKQ02763 1124 aa8.49□□□□□ -1.05
SVIP-204ENST00000530199 PAK1Q13153 545 aa8.49□□□□□ -1.05
SVIP-204ENST00000530199 KIZQ2M2Z5 673 aa8.49□□□□□ -1.05
SVIP-204ENST00000530199 PLA2G4EQ3MJ16 856 aa8.49□□□□□ -1.05
SVIP-204ENST00000530199 KIF18BQ86Y91 864 aa8.49□□□□□ -1.05
SVIP-204ENST00000530199 POLR3GLQ9BT43 218 aa8.49□□□□□ -1.05
SVIP-204ENST00000530199 ATP13A1Q9HD20 1204 aa8.49□□□□□ -1.05
SVIP-204ENST00000530199 ZNF112Q9UJU3 913 aa8.49□□□□□ -1.05
SVIP-204ENST00000530199 PCDHA2Q9Y5H9 948 aa8.49□□□□□ -1.05
SVIP-204ENST00000530199 SPTBN4Q9H254 2564 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 A0A0G2JLL6 359 aaPredicted RBP8.48□□□□□ -1.05
SVIP-204ENST00000530199 BRINP1O60477 761 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 GLRX3O76003 335 aaKnown RBP8.48□□□□□ -1.05
SVIP-204ENST00000530199 PARNO95453 639 aaKnown RBP8.48□□□□□ -1.05
SVIP-204ENST00000530199 CKMP06732 381 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 IL1R1P14778 569 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 EIF2S2P20042 333 aaKnown RBP8.48□□□□□ -1.05
SVIP-204ENST00000530199 ITGB8P26012 769 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 KLRK1P26718 216 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 GUCY2FP51841 1108 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 EGR3Q06889 387 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 ODR4Q5SWX8 454 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 CYP2R1Q6VVX0 501 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 ZPBP2Q6X784 338 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 C15orf52Q6ZUT6 534 aaKnown RBP8.48□□□□□ -1.05
SVIP-204ENST00000530199 LHFPL2Q6ZUX7 228 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 PRRT2Q7Z6L0 340 aaPredicted RBP8.48□□□□□ -1.05
SVIP-204ENST00000530199 FAM83AQ86UY5 434 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 CPNE8Q86YQ8 564 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 ZDHHC13Q8IUH4 622 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 NAT16Q8N8M0 369 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 IGSF22Q8N9C0 903 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 WDR66Q8TBY9 1149 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 SMCR8Q8TEV9 937 aaPredicted RBP8.48□□□□□ -1.05
SVIP-204ENST00000530199 HERVK_113Q902F9 699 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 ZNF341Q9BYN7 854 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 PDLIM7Q9NR12 457 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 ZC3H7BQ9UGR2 993 aaKnown RBP8.48□□□□□ -1.05
SVIP-204ENST00000530199 G3BP2Q9UN86 482 aaKnown RBP8.48□□□□□ -1.05
SVIP-204ENST00000530199 COG5Q9UP83 839 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 ZNF281Q9Y2X9 895 aa8.48□□□□□ -1.05
SVIP-204ENST00000530199 BAHCC1Q9P281 2608 aa8.47□□□□□ -1.05
SVIP-204ENST00000530199 LRRC37A2A6NM11 1700 aa8.47□□□□□ -1.05
SVIP-204ENST00000530199 CBX4O00257 560 aa8.47□□□□□ -1.05
SVIP-204ENST00000530199 DNM1LO00429 736 aa8.47□□□□□ -1.05
SVIP-204ENST00000530199 WNT9AO14904 365 aa8.47□□□□□ -1.05
SVIP-204ENST00000530199 FOSL1P15407 271 aa8.47□□□□□ -1.05
SVIP-204ENST00000530199 BPIP17213 487 aa8.47□□□□□ -1.05
SVIP-204ENST00000530199 SCNN1BP51168 640 aa8.47□□□□□ -1.05
SVIP-204ENST00000530199 EPHB4P54760 987 aa8.47□□□□□ -1.05
SVIP-204ENST00000530199 CACNB2Q08289 660 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms