RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 EFEMP2O95967 443 aa13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 RETP07949 1114 aa13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 CYP3A4P08684 503 aa13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 COL9A2Q14055 689 aaPredicted RBP13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 UBXN2BQ14CS0 331 aa13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 LAIR1Q6GTX8 287 aa13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 PPP1R18Q6NYC8 613 aa13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 MTSS1LQ765P7 747 aa13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 MRPL10Q7Z7H8 261 aaKnown RBP13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 MB21D2Q8IYB1 491 aaPredicted RBP13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 CMTR1Q8N1G2 835 aaKnown RBP13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 ZNF577Q9BSK1 485 aa13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 MYL10Q9BUA6 226 aa13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 LTB4R2Q9NPC1 389 aa13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 PRMT8Q9NR22 394 aaPredicted RBP13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 GABBR1Q9UBS5 961 aa13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 TCEAL9Q9UHQ7 104 aa13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 RAB23Q9ULC3 237 aa13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 MTF2Q9Y483 593 aaPredicted RBP13.13□□□□□ -0.31
AMBRA1-207ENST00000529553 IGLV3-22A0A075B6J6 115 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 FAM86B1E9PN63 330 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 C2CD2LO14523 706 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 B4GALT3O60512 393 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 OATP04181 439 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 FAM86B2P0C5J1 330 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 FSHRP23945 695 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 GLUD2P49448 558 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 DNM2P50570 870 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 SHC2P98077 582 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 DSG1Q02413 1049 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 COL9A3Q14050 684 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 LILRA6Q6PI73 481 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 CASC1Q6TDU7 716 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 PARM1Q6UWI2 310 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 GET4Q7L5D6 327 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 TAS1R1Q7RTX1 841 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 TRMT1LQ7Z2T5 733 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 ZNF410Q86VK4 478 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 RNF168Q8IYW5 571 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 FGF14Q92915 247 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 ZNF668Q96K58 619 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 RPP25Q9BUL9 199 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 UBN1Q9NPG3 1134 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 SH2B1Q9NRF2 756 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 CHST7Q9NS84 486 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 FNIP2Q9P278 1114 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 CDH7Q9ULB5 785 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 CNTNAP2Q9UHC6 1331 aa13.12□□□□□ -0.31
AMBRA1-207ENST00000529553 hCG_1642624A0A1W2PR95 340 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 CCDC69A6NI79 296 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 MEIS3P2A8K0S8 358 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 hCG_1984214I3L0E3 225 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 CSDE1O75534 798 aaKnown RBP13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 LIFRP42702 1097 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 CLK2P49760 499 aaKnown RBP13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 ADCY7P51828 1080 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 SETQ01105 290 aaPredicted RBP13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 PPP2R5DQ14738 602 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 LONRF3Q496Y0 759 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 NFXL1Q6ZNB6 911 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 AGMOQ6ZNB7 445 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 TMTC3Q6ZXV5 915 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 ZNF713Q8N859 430 aaPredicted RBP13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 FANCBQ8NB91 859 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 PGBD1Q96JS3 809 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 IL25Q9H293 177 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 PIN4Q9Y237 131 aaKnown RBP13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 MRPS17Q9Y2R5 130 aaKnown RBP13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 PCDHB2Q9Y5E7 798 aa13.11□□□□□ -0.31
AMBRA1-207ENST00000529553 EVPLQ92817 2033 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 A0A087WZ62 844 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 IGKV6-21A0A0C4DH24 114 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 WDR64B1ANS9 1081 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 TGM5O43548 720 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 ZMYND10O75800 440 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 NAPAP54920 295 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 CREMQ03060 361 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 SPEM2Q0P670 501 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 ACAP1Q15027 740 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 TARBP2Q15633 366 aaKnown RBP13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 CSRP2Q16527 193 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 WWC2Q6AWC2 1192 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 ZNF852Q6ZMS4 543 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 CHD1LQ86WJ1 897 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 SMC5Q8IY18 1101 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 CCDC82Q8N4S0 544 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 CRYGNQ8WXF5 182 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 TMEM87BQ96K49 555 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 FDXACB1Q9BRP7 624 aaPredicted RBP13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 IER2Q9BTL4 223 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 RSAD1Q9HA92 442 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 TAF6LQ9Y6J9 622 aa13.1□□□□□ -0.31
AMBRA1-207ENST00000529553 C2orf16Q68DN1 1984 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 SMCO2A6NFE2 343 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 ZNF862O60290 1169 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 NR1I2O75469 434 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 HNRNPA1P09651 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms