RNA–Protein interactions for RNA: ENST00000529445.1

SORL1-208, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 616 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-208ENST00000529445 KCNC3Q14003 757 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 HERC4Q5GLZ8 1057 aaPredicted RBP13.46□□□□□ -0.25
SORL1-208ENST00000529445 ANKRD54Q6NXT1 300 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 LLGL2Q6P1M3 1020 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 MRPL10Q7Z7H8 261 aaKnown RBP13.46□□□□□ -0.25
SORL1-208ENST00000529445 RNF135Q8IUD6 432 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 CCDC83Q8IWF9 413 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 MRPL43Q8N983 215 aaKnown RBP13.46□□□□□ -0.25
SORL1-208ENST00000529445 CNNM3Q8NE01 707 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 SUSD6Q92537 303 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 CASP10Q92851 521 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 CCDC51Q96ER9 411 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 C8orf76Q96K31 380 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 PHF7Q9BWX1 381 aaPredicted RBP13.46□□□□□ -0.25
SORL1-208ENST00000529445 RSAD1Q9HA92 442 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 XPNPEP1Q9NQW7 623 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 STK39Q9UEW8 545 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 MUTYHQ9UIF7 546 aa13.46□□□□□ -0.25
SORL1-208ENST00000529445 ZNF318Q5VUA4 2279 aa13.46□□□□□ -0.26
SORL1-208ENST00000529445 TECTAO75443 2155 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 POTEMA6NI47 508 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 LOC730098B7Z3J9 87 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 AXLP30530 894 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 HOXA11P31270 313 aaPredicted RBP13.45□□□□□ -0.26
SORL1-208ENST00000529445 MCM7P33993 719 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 RARRES1P49788 294 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 PTENP60484 403 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 HMGN5P82970 282 aaKnown RBP13.45□□□□□ -0.26
SORL1-208ENST00000529445 POU5F1BQ06416 359 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 NCBP1Q09161 790 aaKnown RBP13.45□□□□□ -0.26
SORL1-208ENST00000529445 ORC2Q13416 577 aaPredicted RBP13.45□□□□□ -0.26
SORL1-208ENST00000529445 CAPSQ13938 189 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 GIT2Q14161 759 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 TPRNQ4KMQ1 711 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 NOTUMQ6P988 496 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 AGMOQ6ZNB7 445 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 DDX53Q86TM3 631 aaKnown RBP13.45□□□□□ -0.26
SORL1-208ENST00000529445 TMEM173Q86WV6 379 aaPredicted RBP13.45□□□□□ -0.26
SORL1-208ENST00000529445 IFNLR1Q8IU57 520 aaPredicted RBP13.45□□□□□ -0.26
SORL1-208ENST00000529445 VPS52Q8N1B4 723 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 TMEM87AQ8NBN3 555 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 FAM122AQ96E09 287 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 IGSF21Q96ID5 467 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 GBP3Q9H0R5 595 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 ZBP1Q9H171 429 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 TMEM60Q9H2L4 133 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 FOXP1Q9H334 677 aaPredicted RBP13.45□□□□□ -0.26
SORL1-208ENST00000529445 NRDE2Q9H7Z3 1164 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 UBN1Q9NPG3 1134 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 SH2B1Q9NRF2 756 aaPredicted RBP13.45□□□□□ -0.26
SORL1-208ENST00000529445 KANSL3Q9P2N6 904 aa13.45□□□□□ -0.26
SORL1-208ENST00000529445 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.44□□□□□ -0.26
SORL1-208ENST00000529445 INO80B-WBP1J3KQ70 363 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 TSPAN1O60635 241 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 GALTP07902 379 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 CTSAP10619 480 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 XRCC6P12956 609 aaKnown RBP eCLIP13.44□□□□□ -0.26
SORL1-208ENST00000529445 NCLP19338 710 aaKnown RBP13.44□□□□□ -0.26
SORL1-208ENST00000529445 ATP2B1P20020 1258 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 SLC11A1P49279 550 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 MBTD1Q05BQ5 628 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 CBX2Q14781 532 aaPredicted RBP13.44□□□□□ -0.26
SORL1-208ENST00000529445 UBXN11Q5T124 520 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 SYCE2Q6PIF2 218 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 ASAP3Q8TDY4 903 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 ZSCAN31Q96LW9 406 aaPredicted RBP13.44□□□□□ -0.26
SORL1-208ENST00000529445 FAM193BQ96PV7 902 aaPredicted RBP13.44□□□□□ -0.26
SORL1-208ENST00000529445 TMEM175Q9BSA9 504 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 NFKBIZQ9BYH8 718 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 S1PR5Q9H228 398 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 TUFT1Q9NNX1 390 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 DNAJB4Q9UDY4 337 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 HCFC2Q9Y5Z7 792 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 ZDBF2Q9HCK1 2354 aa13.44□□□□□ -0.26
SORL1-208ENST00000529445 USO1O60763 962 aaKnown RBP13.43□□□□□ -0.26
SORL1-208ENST00000529445 CLASP2O75122 1294 aaKnown RBP13.43□□□□□ -0.26
SORL1-208ENST00000529445 CXCL14O95715 111 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 OR52Z1P0C646 297 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 ITGA4P13612 1032 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 GLRA2P23416 452 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 ARL2P36404 184 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 RBM25P49756 843 aaKnown RBP13.43□□□□□ -0.26
SORL1-208ENST00000529445 GNL2Q13823 731 aaKnown RBP13.43□□□□□ -0.26
SORL1-208ENST00000529445 CES5AQ6NT32 575 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 HACE1Q8IYU2 909 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 FAM184AQ8NB25 1140 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 MCPH1Q8NEM0 835 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 ERMNQ8TAM6 284 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 PIGOQ8TEQ8 1089 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 BCL7CQ8WUZ0 217 aaPredicted RBP13.43□□□□□ -0.26
SORL1-208ENST00000529445 RPGRIP1Q96KN7 1286 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 TRIM6Q9C030 488 aaPredicted RBP13.43□□□□□ -0.26
SORL1-208ENST00000529445 CSRNP2Q9H175 543 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 POLR3FQ9H1D9 316 aaPredicted RBP13.43□□□□□ -0.26
SORL1-208ENST00000529445 DZANK1Q9NVP4 752 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 IPPQ9Y573 584 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 IRAK3Q9Y616 596 aa13.43□□□□□ -0.26
SORL1-208ENST00000529445 B4GALT3O60512 393 aa13.42□□□□□ -0.26
SORL1-208ENST00000529445 POMCP01189 267 aa13.42□□□□□ -0.26
SORL1-208ENST00000529445 SPATA31C1P0DKV0 1188 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms