RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 VPS36Q86VN1 386 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 SYTL5Q8TDW5 730 aaPredicted RBP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 CALR3Q96L12 384 aaKnown RBP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 RNPC3Q96LT9 517 aaKnown RBP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 DDX47Q9H0S4 455 aaKnown RBP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 SUCLA2Q9P2R7 463 aaPredicted RBP17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 INTUQ9ULD6 942 aa17.11■□□□□ 0.33
TM9SF1-208ENST00000529332 F8VZ95 297 aa17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 SART1O43290 800 aaKnown RBP17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 ITGA4P13612 1032 aa17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 SOX5P35711 763 aa17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 STAT1P42224 750 aa17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 HLTFQ14527 1009 aaKnown RBP eCLIP17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 KDM7AQ6ZMT4 941 aa17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 RASGEF1CQ8N431 466 aa17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 KCTD17Q8N5Z5 321 aa17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 ASCC2Q9H1I8 757 aaPredicted RBP17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 NEUROG2Q9H2A3 272 aa17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 PARVGQ9HBI0 331 aa17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 WRAP73Q9P2S5 460 aaPredicted RBP17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 PLAAQ9Y263 795 aa17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 RIPK3Q9Y572 518 aa17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 FRMPD4Q14CM0 1322 aa17.1■□□□□ 0.33
TM9SF1-208ENST00000529332 FMO5P49326 533 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 UBXN2AP68543 259 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 PPP2R5CQ13362 524 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 CBWD6Q4V339 395 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 CBWD3Q5JTY5 395 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 CBWD5Q5RIA9 395 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 CHADLQ6NUI6 762 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 DAAM2Q86T65 1068 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 EIF1ADQ8N9N8 165 aaKnown RBP17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 CHST13Q8NET6 341 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 SLC5A5Q92911 643 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 GPR88Q9GZN0 384 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 OSGEPQ9NPF4 335 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 FBXO40Q9UH90 709 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 GJA5P36382 358 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 NPEPPSP55786 919 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 CUL1Q13616 776 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 DRAP1Q14919 205 aaPredicted RBP17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 UAP1Q16222 522 aaPredicted RBP17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 CEP55Q53EZ4 464 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 EMC10Q5UCC4 262 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 ZNF720Q7Z2F6 126 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 GLYCTKQ8IVS8 523 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 LMBR1Q8WVP7 490 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 HES6Q96HZ4 224 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 SYT11Q9BT88 431 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 COL20A1Q9P218 1284 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 DNAJC12Q9UKB3 198 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 PNMA3Q9UL41 463 aa17.09■□□□□ 0.33
TM9SF1-208ENST00000529332 KRIT1O00522 736 aa17.08■□□□□ 0.33
TM9SF1-208ENST00000529332 EBAG9O00559 213 aa17.08■□□□□ 0.33
TM9SF1-208ENST00000529332 CETPP11597 493 aa17.08■□□□□ 0.33
TM9SF1-208ENST00000529332 HSD17B3P37058 310 aa17.08■□□□□ 0.33
TM9SF1-208ENST00000529332 GTF2A2P52657 109 aa17.08■□□□□ 0.33
TM9SF1-208ENST00000529332 MOGSQ13724 837 aa17.08■□□□□ 0.33
TM9SF1-208ENST00000529332 PCNX4Q63HM2 1172 aa17.08■□□□□ 0.33
TM9SF1-208ENST00000529332 ATP6V1G3Q96LB4 118 aa17.08■□□□□ 0.33
TM9SF1-208ENST00000529332 MKNK1Q9BUB5 465 aa17.08■□□□□ 0.33
TM9SF1-208ENST00000529332 STK33Q9BYT3 514 aa17.08■□□□□ 0.33
TM9SF1-208ENST00000529332 DMAC2Q9NW81 257 aa17.08■□□□□ 0.33
TM9SF1-208ENST00000529332 IGSF9BQ9UPX0 1349 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 H0YGN5 161 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 TRIM49P0CI25 452 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 TRIM49CP0CI26 452 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 NR1D1P20393 614 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 COPB2P35606 906 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 CYP2J2P51589 502 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 ZNF131P52739 623 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 GUCY1A3Q02108 690 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 CEP85LQ5SZL2 805 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 NIPA1Q7RTP0 329 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 MAATS1Q7Z4T9 603 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 RIOX2Q8IUF8 465 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 SYCE1Q8N0S2 351 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 C1orf131Q8NDD1 294 aaKnown RBP17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 AGPAT3Q9NRZ7 376 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 AMACRQ9UHK6 382 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 SAMM50Q9Y512 469 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 NFS1Q9Y697 457 aa17.08■□□□□ 0.32
TM9SF1-208ENST00000529332 A6NNZ2 444 aa17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 CCDC188H7C350 402 aa17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 BUB1BO60566 1050 aaPredicted RBP17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 FLT3P36888 993 aa17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 BAATQ14032 418 aaPredicted RBP17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 TUBB8Q3ZCM7 444 aa17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 ARHGEF16Q5VV41 709 aa17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 XRRA1Q6P2D8 792 aa17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 EFCAB13Q8IY85 973 aa17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 BANK1Q8NDB2 785 aa17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 SLC35G2Q8TBE7 412 aa17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 GTF3C2Q8WUA4 911 aaPredicted RBP17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 RMDN3Q96TC7 470 aa17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 MXRA8Q9BRK3 442 aa17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 TMBIM4Q9HC24 238 aa17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 FAM169AQ9Y6X4 670 aa17.07■□□□□ 0.32
TM9SF1-208ENST00000529332 NCANO14594 1321 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms