RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 DMRTA1Q5VZB9 504 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 EFCAB12Q6NXP0 572 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 Q6ZNB5 142 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 NUDT18Q6ZVK8 323 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 LRRC8DQ7L1W4 858 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 MTERF4Q7Z6M4 381 aaKnown RBP6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 RSPH3Q86UC2 560 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 LINC01465Q8N7H1 131 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 ERMNQ8TAM6 284 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 USP28Q96RU2 1077 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 SH2D3AQ9BRG2 576 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 MKNK1Q9BUB5 465 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 CCDC94Q9BW85 323 aaPredicted RBP6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 RAB34Q9BZG1 259 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 IL23AQ9NPF7 189 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 CYP26B1Q9NR63 512 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 ANKEF1Q9NU02 776 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 SEPT9Q9UHD8 586 aaPredicted RBP6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 ZDHHC9Q9Y397 364 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 COMMD10Q9Y6G5 202 aa6.97□□□□□ -1.29
ATPAF1-209ENST00000529214 PDE4DIPQ5VU43 2346 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 A0A087WWV3 80 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 A0A1W2PPC1 479 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 VWA3AA6NCI4 1184 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 NDUFB5O43674 189 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 NBNO60934 754 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 FGBP02675 491 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 CXCL10P02778 98 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 S100BP04271 92 aaPredicted RBP6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 PFKMP08237 780 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 FAM200BP0CF97 657 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 ACRP10323 421 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 TMOD1P28289 359 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 CDC25AP30304 524 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 PTPN5P54829 565 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 NPEPPSP55786 919 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 CEBPZQ03701 1054 aaKnown RBP6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 MGAT3Q09327 533 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 TBC1D8BQ0IIM8 1120 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 MBTPS1Q14703 1052 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 SLC39A14Q15043 492 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 SHHQ15465 462 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 MTERF2Q49AM1 385 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 XKR9Q5GH70 373 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 TMEM240Q5SV17 173 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 IER5Q5VY09 327 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 HAUS3Q68CZ6 603 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 EP400NLQ6ZTU2 488 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 ZNF365Q70YC5 407 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 METTL13Q8N6R0 699 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 PIGOQ8TEQ8 1089 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 CEP170P1Q96L14 293 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 AK8Q96MA6 479 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 ZNF396Q96N95 335 aaPredicted RBP6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 NACC1Q96RE7 527 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 MMTAG2Q9BU76 263 aaKnown RBP6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 FTOQ9C0B1 505 aaKnown RBP eCLIP6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 FAM49AQ9H0Q0 323 aaPredicted RBP6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 DHX33Q9H6R0 707 aaKnown RBP6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 SUDS3Q9H7L9 328 aaPredicted RBP6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 SUGCTQ9HAC7 445 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 FAM13BQ9NYF5 915 aa6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 TPX2Q9ULW0 747 aaKnown RBP6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 SRPRBQ9Y5M8 271 aaKnown RBP6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 MORC2Q9Y6X9 1032 aaPredicted RBP6.96□□□□□ -1.3
ATPAF1-209ENST00000529214 TRIP12Q14669 1992 aaPredicted RBP6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 PP2D1A8MPX8 630 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 DNAJC6O75061 913 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 CTSHP09668 335 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 MARCKSP29966 332 aaPredicted RBP6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 LONP1P36776 959 aaKnown RBP6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 CCT6AP40227 531 aaKnown RBP6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 MAPK8P45983 427 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 NASPP49321 788 aaPredicted RBP6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 RARRES1P49788 294 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 MRPS6P82932 125 aaKnown RBP6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 CDC42EP1Q00587 391 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 GRIN1Q05586 938 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 TMEM62Q0P6H9 643 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 MAP7D1Q3KQU3 841 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 C9orf50Q5SZB4 431 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 HYIQ5T013 277 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 KRT79Q5XKE5 535 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 PLA2G4FQ68DD2 849 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 ATL3Q6DD88 541 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 DEFB128Q7Z7B8 93 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 TDHQ8IZJ6 230 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 LRRC71Q8N4P6 559 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 LINC00301Q8NCQ3 95 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 HERVK_113Q902F9 699 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 MYCBPQ99417 103 aaPredicted RBP6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 JPH2Q9BR39 696 aaPredicted RBP6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 CELF4Q9BZC1 486 aaKnown RBP6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 OSBPL7Q9BZF2 842 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 DBR1Q9UK59 544 aaKnown RBP6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 KIAA1024Q9UPX6 916 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 CDY2AQ9Y6F7 541 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 SQORQ9Y6N5 450 aa6.95□□□□□ -1.3
ATPAF1-209ENST00000529214 KDM3AQ9Y4C1 1321 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms