RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SLC5A5Q92911 643 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 SSBP3Q9BWW4 388 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-212ENST00000529046 JADE2Q9NQC1 790 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 INCENPQ9NQS7 918 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 RIMS2Q9UQ26 1411 aa6.48□□□□□ -1.37
CSDE1-212ENST00000529046 CFAP65Q6ZU64 1925 aaKnown RBP6.48□□□□□ -1.37
CSDE1-212ENST00000529046 XIRP1Q702N8 1843 aaKnown RBP6.48□□□□□ -1.37
CSDE1-212ENST00000529046 TMEM131LA2VDJ0 1609 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 MSH6P52701 1360 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 GCC2Q8IWJ2 1684 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-212ENST00000529046 NPEPPSL1A6NEC2 478 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 PRLP01236 227 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 CD40P25942 277 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 LSP1P33241 339 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 EPHB4P54760 987 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 SESN3P58005 492 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 ADAM17P78536 824 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 DPP8Q6V1X1 898 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-212ENST00000529046 CXXC5Q7LFL8 322 aaKnown RBP6.47□□□□□ -1.37
CSDE1-212ENST00000529046 RASSF3Q86WH2 238 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 REXO1L1PQ8IX06 675 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 CLRN3Q8NCR9 226 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 CHST13Q8NET6 341 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 E2F7Q96AV8 911 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 AJUBAQ96IF1 538 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 GPR20Q99678 358 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 BTBD2Q9BX70 525 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 TOMM22Q9NS69 142 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 TYW1Q9NV66 732 aaKnown RBP6.47□□□□□ -1.37
CSDE1-212ENST00000529046 PPP4R1LQ9P1A2 415 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 DIP2AQ14689 1571 aa6.47□□□□□ -1.37
CSDE1-212ENST00000529046 CSF2RBP32927 897 aa6.46□□□□□ -1.38
CSDE1-212ENST00000529046 ERVK-21P61565 698 aa6.46□□□□□ -1.38
CSDE1-212ENST00000529046 FAPQ12884 760 aa6.46□□□□□ -1.38
CSDE1-212ENST00000529046 BROXQ5VW32 411 aa6.46□□□□□ -1.38
CSDE1-212ENST00000529046 ADAMTS13Q76LX8 1427 aa6.46□□□□□ -1.38
CSDE1-212ENST00000529046 GPR155Q7Z3F1 870 aa6.46□□□□□ -1.38
CSDE1-212ENST00000529046 IFNL2Q8IZJ0 200 aa6.46□□□□□ -1.38
CSDE1-212ENST00000529046 ZNF496Q96IT1 587 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-212ENST00000529046 MAML3Q96JK9 1138 aa6.46□□□□□ -1.38
CSDE1-212ENST00000529046 C8orf49Q96NF6 230 aa6.46□□□□□ -1.38
CSDE1-212ENST00000529046 ZDHHC5Q9C0B5 715 aa6.46□□□□□ -1.38
CSDE1-212ENST00000529046 PUS7LQ9H0K6 701 aaKnown RBP6.46□□□□□ -1.38
CSDE1-212ENST00000529046 RGS17Q9UGC6 210 aaPredicted RBP6.46□□□□□ -1.38
CSDE1-212ENST00000529046 IQGAP3Q86VI3 1631 aa6.46□□□□□ -1.38
CSDE1-212ENST00000529046 NUP155O75694 1391 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 DCCP43146 1447 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 ALG1L2C9J202 215 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 IBSPP21815 317 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-212ENST00000529046 ECE1P42892 770 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 IL13RA1P78552 427 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 MYBPC3Q14896 1274 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 DDB1Q16531 1140 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 SLFN13Q68D06 897 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 CIR1Q86X95 450 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-212ENST00000529046 PHYKPLQ8IUZ5 450 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 ATL2Q8NHH9 583 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 ORAI2Q96SN7 254 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 MENTQ9BUN1 341 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 HAPLN2Q9GZV7 340 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 KATNBL1Q9H079 304 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 UCKL1Q9NWZ5 548 aa6.45□□□□□ -1.38
CSDE1-212ENST00000529046 CHD2O14647 1828 aaKnown RBP6.45□□□□□ -1.38
CSDE1-212ENST00000529046 UBA6A0AVT1 1052 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-212ENST00000529046 PRAMEF22A3QJZ6 481 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 CUTAO60888 179 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 PRKD3O94806 890 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 POLD1P28340 1107 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 USP10Q14694 798 aaKnown RBP6.44□□□□□ -1.38
CSDE1-212ENST00000529046 INAVAQ3KP66 663 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 WDR72Q3MJ13 1102 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 LRSAM1Q6UWE0 723 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 STAG1Q8WVM7 1258 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 RTF1Q92541 710 aaKnown RBP6.44□□□□□ -1.38
CSDE1-212ENST00000529046 CARD11Q9BXL7 1154 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 TRIM8Q9BZR9 551 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 PITHD1Q9GZP4 211 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-212ENST00000529046 OR10A5Q9H207 317 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 ST6GALNAC2Q9UJ37 374 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 SLC4A7Q9Y6M7 1214 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 SPATA31A6Q5VVP1 1343 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 JCADQ9P266 1359 aa6.44□□□□□ -1.38
CSDE1-212ENST00000529046 E9PCH4 1651 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 hCG_2014768A0A024R1R8 64 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 GPR42O15529 346 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 CNOT4O95628 575 aaKnown RBP6.43□□□□□ -1.38
CSDE1-212ENST00000529046 INSRRP14616 1297 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 ROM1Q03395 351 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 TOP3AQ13472 1001 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-212ENST00000529046 ZXDCQ2QGD7 858 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-212ENST00000529046 ZNF568Q3ZCX4 644 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 TTC38Q5R3I4 469 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 FRMD7Q6ZUT3 714 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 GGNQ86UU5 652 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 HIPK4Q8NE63 616 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 PTPN18Q99952 460 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 KRTAP3-1Q9BYR8 98 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 WNT8AQ9H1J5 351 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 MEGF9Q9H1U4 602 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms