RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 SCAND2PQ9GZW5 306 aaPredicted RBP4.14□□□□□ -1.75
BRCA2-203ENST00000528762 POFUT1Q9H488 388 aa4.14□□□□□ -1.75
BRCA2-203ENST00000528762 L2HGDHQ9H9P8 463 aa4.14□□□□□ -1.75
BRCA2-203ENST00000528762 PPP4R1LQ9P1A2 415 aa4.14□□□□□ -1.75
BRCA2-203ENST00000528762 ANO9A1A5B4 782 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 A6NNZ2 444 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 MAFGO15525 162 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 OSMP13725 252 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 PHKG2P15735 406 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 PDCP20941 246 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 IL13P35225 146 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 HTR3AP46098 478 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 USP14P54578 494 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 LGALS4P56470 323 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 SLC6A3Q01959 620 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 KIF23Q02241 960 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-203ENST00000528762 ROM1Q03395 351 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 ADCY2Q08462 1091 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 PICALMQ13492 652 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 SAFBQ15424 915 aaKnown RBP eCLIP4.13□□□□□ -1.75
BRCA2-203ENST00000528762 PITRM1Q5JRX3 1037 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 ATAT1Q5SQI0 421 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 TEPPQ6URK8 271 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 CHST15Q7LFX5 561 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-203ENST00000528762 RTN4RL1Q86UN2 441 aaPredicted RBP4.13□□□□□ -1.75
BRCA2-203ENST00000528762 SPICE1Q8N0Z3 855 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 FAM43AQ8N2R8 423 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 SLC16A11Q8NCK7 471 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 CALML6Q8TD86 181 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 IGDCC4Q8TDY8 1250 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 RSAD2Q8WXG1 361 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 AUTS2Q8WXX7 1259 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 ZCCHC14Q8WYQ9 949 aaKnown RBP4.13□□□□□ -1.75
BRCA2-203ENST00000528762 HPS3Q969F9 1004 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 TOE1Q96GM8 510 aaKnown RBP4.13□□□□□ -1.75
BRCA2-203ENST00000528762 ARPC5LQ9BPX5 153 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 JADE2Q9NQC1 790 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 UCKL1Q9NWZ5 548 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 DTLQ9NZJ0 730 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 ARHGAP28Q9P2N2 729 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 CNOT11Q9UKZ1 510 aaKnown RBP4.13□□□□□ -1.75
BRCA2-203ENST00000528762 ZDHHC9Q9Y397 364 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 PPP2R3BQ9Y5P8 575 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 MYPNQ86TC9 1320 aa4.13□□□□□ -1.75
BRCA2-203ENST00000528762 ST20-MTHFSA0A0A6YYL1 179 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 APAF1O14727 1248 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 LAMTOR5O43504 91 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 LRG1P02750 347 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 IFIT2P09913 472 aaKnown RBP4.12□□□□□ -1.75
BRCA2-203ENST00000528762 AOAHP28039 575 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 BCAR1P56945 870 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 CDK17Q00537 523 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 ALDH6A1Q02252 535 aaKnown RBP4.12□□□□□ -1.75
BRCA2-203ENST00000528762 MORC3Q14149 939 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 DHX8Q14562 1220 aaKnown RBP4.12□□□□□ -1.75
BRCA2-203ENST00000528762 MUM1Q2TAK8 710 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 ANO4Q32M45 955 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 LONRF3Q496Y0 759 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 PRAMEF9Q5VWM5 478 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 IL31Q6EBC2 164 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 SLFN12LQ6IEE8 588 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 KIAA1841Q6NSI8 718 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 TRMT10BQ6PF06 316 aaKnown RBP4.12□□□□□ -1.75
BRCA2-203ENST00000528762 UNQ6494/PRO21346Q6UXR6 183 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 KANSL1Q7Z3B3 1105 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 C11orf96Q7Z7L8 435 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 THEMISQ8N1K5 641 aaPredicted RBP4.12□□□□□ -1.75
BRCA2-203ENST00000528762 WDR48Q8TAF3 677 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 FATE1Q969F0 183 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 COA7Q96BR5 231 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 MBD6Q96DN6 1003 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 C1GALT1C1Q96EU7 318 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 SAMD11Q96NU1 681 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 CLIC6Q96NY7 704 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 STRBPQ96SI9 672 aaKnown RBP4.12□□□□□ -1.75
BRCA2-203ENST00000528762 FOXB1Q99853 325 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 TMEM168Q9H0V1 697 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 KCTD10Q9H3F6 313 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 IFT122Q9HBG6 1241 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 HSPBP1Q9NZL4 362 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 BTBD7Q9P203 1132 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 DPP7Q9UHL4 492 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 TAGLN3Q9UI15 199 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 PRSS50Q9UI38 385 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 TUBD1Q9UJT1 453 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 TMPRSS11EQ9UL52 423 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 DNM3Q9UQ16 869 aa4.12□□□□□ -1.75
BRCA2-203ENST00000528762 NPEPPSL1A6NEC2 478 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 GPR42O15529 346 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 B4GALT4O60513 344 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 PRLP01236 227 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 C6P13671 934 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 PTGS1P23219 599 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 SERPINB3P29508 390 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 SLC16A1P53985 500 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 ZNF280AP59817 542 aaPredicted RBP4.11□□□□□ -1.75
BRCA2-203ENST00000528762 SAFB2Q14151 953 aaKnown RBP eCLIP4.11□□□□□ -1.75
BRCA2-203ENST00000528762 ZNF267Q14586 743 aaPredicted RBP4.11□□□□□ -1.75
BRCA2-203ENST00000528762 MYBPC3Q14896 1274 aa4.11□□□□□ -1.75
BRCA2-203ENST00000528762 NOLC1Q14978 699 aaKnown RBP eCLIP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms