RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 TRPC3Q13507 836 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 SMAD1Q15797 465 aaKnown RBP19.17■□□□□ 0.66
LTBP3-210ENST00000528516 CTAGE3PQ8IX95 158 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 DYDC2Q96IM9 177 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 PARVGQ9HBI0 331 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 METTL14Q9HCE5 456 aaKnown RBP19.17■□□□□ 0.66
LTBP3-210ENST00000528516 CEP72Q9P209 647 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 ZNF148Q9UQR1 794 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 DAGLAQ9Y4D2 1042 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 CD58P19256 250 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 STX2P32856 288 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 CRKP46108 304 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 ZNF131P52739 623 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 LRRC23Q53EV4 343 aaPredicted RBP19.17■□□□□ 0.66
LTBP3-210ENST00000528516 SYDE2Q5VT97 1194 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 GBP7Q8N8V2 638 aaPredicted RBP19.17■□□□□ 0.66
LTBP3-210ENST00000528516 KBTBD4Q9NVX7 518 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 FGFR4P22455 802 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 HNRNPH3P31942 346 aaKnown RBP19.17■□□□□ 0.66
LTBP3-210ENST00000528516 RAB27AP51159 221 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 ZNF268Q14587 947 aaPredicted RBP19.17■□□□□ 0.66
LTBP3-210ENST00000528516 FAM118BQ9BPY3 351 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 LRRC4CQ9HCJ2 640 aa19.17■□□□□ 0.66
LTBP3-210ENST00000528516 FLT1P17948 1338 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 C5P01031 1676 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 AHCYL1O43865 530 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 PAEPP09466 180 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 NFIAQ12857 509 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 VPS72Q15906 364 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 ZNF449Q6P9G9 518 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 CERKQ8TCT0 537 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 NUDT12Q9BQG2 462 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 TEKT3Q9BXF9 490 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 WDR91A4D1P6 747 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 GOLGA8SH3BPF8 625 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 THAP12O43422 761 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 USP11P51784 963 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 STAT2P52630 851 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 FAM47EQ6ZV65 393 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 FBXO33Q7Z6M2 555 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 B4GALNT2Q8NHY0 566 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 EPS8L3Q8TE67 593 aaKnown RBP19.16■□□□□ 0.66
LTBP3-210ENST00000528516 BAP1Q92560 729 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 CCDC17Q96LX7 622 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 MTMR4Q9NYA4 1195 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 INHBEP58166 350 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 IGBP1P78318 339 aa19.16■□□□□ 0.66
LTBP3-210ENST00000528516 ADAMTS3O15072 1205 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 LINGO3P0C6S8 592 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 LIG4P49917 911 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 ERFP50548 548 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 C6orf118Q5T5N4 469 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 BARGINQ6ZT62 677 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 NUDCD1Q96RS6 583 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 CCSER1Q9C0I3 900 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 MAGEF1Q9HAY2 307 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 DESP17661 470 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 GUF1Q8N442 669 aaKnown RBP19.15■□□□□ 0.66
LTBP3-210ENST00000528516 RSPH10B2B2RC85 870 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 RSPH10BP0C881 870 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 AOC3Q16853 763 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 SCYL2Q6P3W7 929 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 KIAA0895Q8NCT3 520 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 MTFR1LQ9H019 292 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 PICK1Q9NRD5 415 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 C2CD2Q9Y426 696 aa19.15■□□□□ 0.66
LTBP3-210ENST00000528516 CHRNA5P30532 468 aa19.14■□□□□ 0.66
LTBP3-210ENST00000528516 SF3B3Q15393 1217 aaKnown RBP19.14■□□□□ 0.66
LTBP3-210ENST00000528516 SPATA21Q7Z572 469 aa19.14■□□□□ 0.66
LTBP3-210ENST00000528516 SLC51AQ86UW1 340 aa19.14■□□□□ 0.66
LTBP3-210ENST00000528516 CEP170P1Q96L14 293 aa19.14■□□□□ 0.66
LTBP3-210ENST00000528516 SLITRK6Q9H5Y7 841 aa19.14■□□□□ 0.66
LTBP3-210ENST00000528516 RARAP10276 462 aa19.14■□□□□ 0.65
LTBP3-210ENST00000528516 RCAN1P53805 252 aa19.14■□□□□ 0.65
LTBP3-210ENST00000528516 KLC1Q07866 573 aa19.14■□□□□ 0.65
LTBP3-210ENST00000528516 DRAP1Q14919 205 aaPredicted RBP19.14■□□□□ 0.65
LTBP3-210ENST00000528516 ARHGEF2Q92974 986 aaKnown RBP19.14■□□□□ 0.65
LTBP3-210ENST00000528516 GJD4Q96KN9 370 aaPredicted RBP19.14■□□□□ 0.65
LTBP3-210ENST00000528516 PCDHGC5Q9Y5F6 944 aa19.14■□□□□ 0.65
LTBP3-210ENST00000528516 EPC2Q52LR7 807 aa19.14■□□□□ 0.65
LTBP3-210ENST00000528516 C2CD6Q53TS8 623 aa19.14■□□□□ 0.65
LTBP3-210ENST00000528516 IL17RBQ9NRM6 502 aa19.14■□□□□ 0.65
LTBP3-210ENST00000528516 ADAM22Q9P0K1 906 aa19.14■□□□□ 0.65
LTBP3-210ENST00000528516 MAD2L2Q9UI95 211 aa19.14■□□□□ 0.65
LTBP3-210ENST00000528516 TTC7AQ9ULT0 858 aaPredicted RBP19.14■□□□□ 0.65
LTBP3-210ENST00000528516 ABCB11O95342 1321 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 SPDYE5A6NIY4 337 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 NOP56O00567 594 aaKnown RBP19.13■□□□□ 0.65
LTBP3-210ENST00000528516 SLC16A4O15374 487 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 SNX3O60493 162 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 MYBP10242 640 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 MXI1P50539 228 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 MTERF2Q49AM1 385 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 PRR5LQ6MZQ0 368 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 SEPT9Q9UHD8 586 aaPredicted RBP19.13■□□□□ 0.65
LTBP3-210ENST00000528516 MRPL11Q9Y3B7 192 aaKnown RBP19.13■□□□□ 0.65
LTBP3-210ENST00000528516 TNS2Q63HR2 1409 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.13■□□□□ 0.65
LTBP3-210ENST00000528516 GAS8O95995 478 aa19.13■□□□□ 0.65
LTBP3-210ENST00000528516 ZRSR2Q15696 482 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms