RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 LMAN2LQ9H0V9 348 aa13.39□□□□□ -0.27
SDHD-205ENST00000528048 RC3H2Q9HBD1 1191 aaKnown RBP13.39□□□□□ -0.27
SDHD-205ENST00000528048 POLD4Q9HCU8 107 aa13.39□□□□□ -0.27
SDHD-205ENST00000528048 UBN1Q9NPG3 1134 aa13.39□□□□□ -0.27
SDHD-205ENST00000528048 SRPRBQ9Y5M8 271 aaKnown RBP13.39□□□□□ -0.27
SDHD-205ENST00000528048 C5orf67F2Z3F1 127 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 TSPAN1O60635 241 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 KRT18P05783 430 aaKnown RBP13.38□□□□□ -0.27
SDHD-205ENST00000528048 ZSCAN22P10073 491 aaPredicted RBP13.38□□□□□ -0.27
SDHD-205ENST00000528048 ITGA4P13612 1032 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 HOXB3P14651 431 aaPredicted RBP13.38□□□□□ -0.27
SDHD-205ENST00000528048 LAG3P18627 525 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 HOXA11P31270 313 aaPredicted RBP13.38□□□□□ -0.27
SDHD-205ENST00000528048 SMTNP53814 917 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 RNASELQ05823 741 aaKnown RBP13.38□□□□□ -0.27
SDHD-205ENST00000528048 DMP1Q13316 513 aaPredicted RBP13.38□□□□□ -0.27
SDHD-205ENST00000528048 SLC39A14Q15043 492 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 LONRF3Q496Y0 759 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 RINT1Q6NUQ1 792 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 APBB1IPQ7Z5R6 666 aaPredicted RBP13.38□□□□□ -0.27
SDHD-205ENST00000528048 ZNF598Q86UK7 904 aaKnown RBP13.38□□□□□ -0.27
SDHD-205ENST00000528048 THNSL1Q8IYQ7 743 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 LRRC43Q8N309 656 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 SYT2Q8N9I0 419 aaPredicted RBP13.38□□□□□ -0.27
SDHD-205ENST00000528048 KRI1Q8N9T8 703 aaKnown RBP13.38□□□□□ -0.27
SDHD-205ENST00000528048 HELQQ8TDG4 1101 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 P2RX5Q93086 422 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 CPB2Q96IY4 423 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 PRIMPOLQ96LW4 560 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 CASD1Q96PB1 797 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 PNMA5Q96PV4 448 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 CSRNP2Q9H175 543 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 KCND2Q9NZV8 630 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 KANSL3Q9P2N6 904 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 DAXXQ9UER7 740 aaPredicted RBP13.38□□□□□ -0.27
SDHD-205ENST00000528048 PUF60Q9UHX1 559 aaKnown RBP13.38□□□□□ -0.27
SDHD-205ENST00000528048 RBM19Q9Y4C8 960 aaKnown RBP13.38□□□□□ -0.27
SDHD-205ENST00000528048 PHLPP2Q6ZVD8 1323 aa13.38□□□□□ -0.27
SDHD-205ENST00000528048 CARNS1A5YM72 827 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 K7ERI5 159 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 LPXNO60711 386 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 GUCY2CP25092 1073 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 ALDH7A1P49419 539 aaKnown RBP13.37□□□□□ -0.27
SDHD-205ENST00000528048 PEX3P56589 373 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 KRT17Q04695 432 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 PRPF4BQ13523 1007 aaKnown RBP13.37□□□□□ -0.27
SDHD-205ENST00000528048 DHX8Q14562 1220 aaKnown RBP13.37□□□□□ -0.27
SDHD-205ENST00000528048 PTPAQ15257 358 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 TMEM119Q4V9L6 283 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 TIGD5Q53EQ6 642 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 NOMO2Q5JPE7 1267 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 C1orf186Q6ZWK4 172 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 MRPL10Q7Z7H8 261 aaKnown RBP13.37□□□□□ -0.27
SDHD-205ENST00000528048 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.37□□□□□ -0.27
SDHD-205ENST00000528048 KLHL23Q8NBE8 558 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 MICAL1Q8TDZ2 1067 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 LPPQ93052 612 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 PPP2R3CQ969Q6 453 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 ZNF558Q96NG5 402 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 FAM193BQ96PV7 902 aaPredicted RBP13.37□□□□□ -0.27
SDHD-205ENST00000528048 USP28Q96RU2 1077 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 RUSC1Q9BVN2 902 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 FZD8Q9H461 694 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 C17orf75Q9HAS0 396 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 ALG13Q9NP73 1137 aaKnown RBP13.37□□□□□ -0.27
SDHD-205ENST00000528048 KMT5AQ9NQR1 393 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 TFIP11Q9UBB9 837 aaKnown RBP13.37□□□□□ -0.27
SDHD-205ENST00000528048 PLAGL2Q9UPG8 496 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 INPP5FQ9Y2H2 1132 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 SCN5AQ14524 2016 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 CNTNAP2Q9UHC6 1331 aa13.37□□□□□ -0.27
SDHD-205ENST00000528048 TANC1Q9C0D5 1861 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 A0A1B0GUA9 196 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 SFI1A8K8P3 1242 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 ACKR2O00590 384 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 HIP1RO75146 1068 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 PRKCBP05771 671 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 ARF4P18085 180 aaPredicted RBP13.36□□□□□ -0.27
SDHD-205ENST00000528048 NCLP19338 710 aaKnown RBP13.36□□□□□ -0.27
SDHD-205ENST00000528048 DDIT3P35638 169 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 RAD51AP2Q09MP3 1159 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 BMS1Q14692 1282 aaKnown RBP13.36□□□□□ -0.27
SDHD-205ENST00000528048 FAM187BQ17R55 369 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 FOXD4L6Q3SYB3 417 aaPredicted RBP13.36□□□□□ -0.27
SDHD-205ENST00000528048 CLLU1OSQ5K130 101 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 RRAGBQ5VZM2 374 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 CDCA2Q69YH5 1023 aaPredicted RBP13.36□□□□□ -0.27
SDHD-205ENST00000528048 SLC27A1Q6PCB7 646 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 FOXD4L3Q6VB84 417 aaPredicted RBP13.36□□□□□ -0.27
SDHD-205ENST00000528048 KCNK18Q7Z418 384 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 BSNDQ8WZ55 320 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 ADPGKQ9BRR6 497 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 KRTAP3-3Q9BYR6 98 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 KRTAP3-2Q9BYR7 98 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 CCSER1Q9C0I3 900 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 RSAD1Q9HA92 442 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 FBXO2Q9UK22 296 aaPredicted RBP13.36□□□□□ -0.27
SDHD-205ENST00000528048 CFAP45Q9UL16 551 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 COG5Q9UP83 839 aa13.36□□□□□ -0.27
SDHD-205ENST00000528048 TRIP12Q14669 1992 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms