RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 PTPN14Q15678 1187 aa17.62■□□□□ 0.41
CTTN-212ENST00000527962 GPR149Q86SP6 731 aa17.62■□□□□ 0.41
CTTN-212ENST00000527962 TMEM173Q86WV6 379 aaPredicted RBP17.62■□□□□ 0.41
CTTN-212ENST00000527962 TCP11Q8WWU5 503 aa17.62■□□□□ 0.41
CTTN-212ENST00000527962 ZNF274Q96GC6 653 aaPredicted RBP17.62■□□□□ 0.41
CTTN-212ENST00000527962 MBOAT7Q96N66 472 aa17.62■□□□□ 0.41
CTTN-212ENST00000527962 RSAD1Q9HA92 442 aa17.62■□□□□ 0.41
CTTN-212ENST00000527962 EPB41L2O43491 1005 aaKnown RBP17.61■□□□□ 0.41
CTTN-212ENST00000527962 CDKL5O76039 1030 aa17.61■□□□□ 0.41
CTTN-212ENST00000527962 GCFC2P16383 781 aaKnown RBP17.61■□□□□ 0.41
CTTN-212ENST00000527962 PPP2R5CQ13362 524 aa17.61■□□□□ 0.41
CTTN-212ENST00000527962 TDGQ13569 410 aa17.61■□□□□ 0.41
CTTN-212ENST00000527962 LETM2Q2VYF4 491 aa17.61■□□□□ 0.41
CTTN-212ENST00000527962 C15orf39Q6ZRI6 1047 aa17.61■□□□□ 0.41
CTTN-212ENST00000527962 MRPL10Q7Z7H8 261 aaKnown RBP17.61■□□□□ 0.41
CTTN-212ENST00000527962 SKAP1Q86WV1 359 aa17.61■□□□□ 0.41
CTTN-212ENST00000527962 KSR1Q8IVT5 923 aa17.61■□□□□ 0.41
CTTN-212ENST00000527962 PRPF31Q8WWY3 499 aaKnown RBP17.61■□□□□ 0.41
CTTN-212ENST00000527962 IFT122Q9HBG6 1241 aa17.61■□□□□ 0.41
CTTN-212ENST00000527962 DNAJB4Q9UDY4 337 aa17.61■□□□□ 0.41
CTTN-212ENST00000527962 ERLIN2O94905 339 aa17.6■□□□□ 0.41
CTTN-212ENST00000527962 SSBP05455 408 aaKnown RBP eCLIP17.6■□□□□ 0.41
CTTN-212ENST00000527962 URODP06132 367 aa17.6■□□□□ 0.41
CTTN-212ENST00000527962 INF2Q27J81 1249 aa17.6■□□□□ 0.41
CTTN-212ENST00000527962 PLA2G4FQ68DD2 849 aa17.6■□□□□ 0.41
CTTN-212ENST00000527962 PPP4R3AQ6IN85 833 aa17.6■□□□□ 0.41
CTTN-212ENST00000527962 CYP26C1Q6V0L0 522 aa17.6■□□□□ 0.41
CTTN-212ENST00000527962 ZNF280BQ86YH2 543 aa17.6■□□□□ 0.41
CTTN-212ENST00000527962 TMEM105Q8N8V8 129 aa17.6■□□□□ 0.41
CTTN-212ENST00000527962 STAMQ92783 540 aa17.6■□□□□ 0.41
CTTN-212ENST00000527962 SNX27Q96L92 541 aa17.6■□□□□ 0.41
CTTN-212ENST00000527962 KLHL5Q96PQ7 755 aa17.6■□□□□ 0.41
CTTN-212ENST00000527962 ZSWIM6Q9HCJ5 1215 aa17.6■□□□□ 0.41
CTTN-212ENST00000527962 FBXL21Q9UKT6 434 aa17.6■□□□□ 0.41
CTTN-212ENST00000527962 M0R2N6 131 aa17.59■□□□□ 0.41
CTTN-212ENST00000527962 TBX3O15119 743 aa17.59■□□□□ 0.41
CTTN-212ENST00000527962 ADH1AP07327 375 aa17.59■□□□□ 0.41
CTTN-212ENST00000527962 CNPP09543 421 aaKnown RBP17.59■□□□□ 0.41
CTTN-212ENST00000527962 ITGA4P13612 1032 aa17.59■□□□□ 0.41
CTTN-212ENST00000527962 AXLP30530 894 aa17.59■□□□□ 0.41
CTTN-212ENST00000527962 CLCN4P51793 760 aa17.59■□□□□ 0.41
CTTN-212ENST00000527962 FOXK2Q01167 660 aa17.59■□□□□ 0.41
CTTN-212ENST00000527962 LAMTOR4Q0VGL1 99 aa17.59■□□□□ 0.41
CTTN-212ENST00000527962 AGMOQ6ZNB7 445 aa17.59■□□□□ 0.41
CTTN-212ENST00000527962 NEK8Q86SG6 692 aa17.59■□□□□ 0.41
CTTN-212ENST00000527962 HACE1Q8IYU2 909 aa17.59■□□□□ 0.41
CTTN-212ENST00000527962 FLCNQ8NFG4 579 aa17.59■□□□□ 0.41
CTTN-212ENST00000527962 BCL7CQ8WUZ0 217 aaPredicted RBP17.59■□□□□ 0.41
CTTN-212ENST00000527962 IGSF9Q9P2J2 1179 aa17.59■□□□□ 0.41
CTTN-212ENST00000527962 MEIS3P2A8K0S8 358 aa17.58■□□□□ 0.4
CTTN-212ENST00000527962 BAG4O95429 457 aaKnown RBP17.58■□□□□ 0.4
CTTN-212ENST00000527962 POMCP01189 267 aa17.58■□□□□ 0.4
CTTN-212ENST00000527962 SOD2P04179 222 aa17.58■□□□□ 0.4
CTTN-212ENST00000527962 NCLP19338 710 aaKnown RBP17.58■□□□□ 0.4
CTTN-212ENST00000527962 YWHABP31946 246 aaKnown RBP17.58■□□□□ 0.4
CTTN-212ENST00000527962 NBL1P41271 181 aa17.58■□□□□ 0.4
CTTN-212ENST00000527962 AK2P54819 239 aa17.58■□□□□ 0.4
CTTN-212ENST00000527962 NPEPPSP55786 919 aa17.58■□□□□ 0.4
CTTN-212ENST00000527962 MXD4Q14582 209 aaPredicted RBP17.58■□□□□ 0.4
CTTN-212ENST00000527962 KANK3Q6NY19 840 aa17.58■□□□□ 0.4
CTTN-212ENST00000527962 C4orf19Q8IY42 314 aa17.58■□□□□ 0.4
CTTN-212ENST00000527962 RNF149Q8NC42 400 aa17.58■□□□□ 0.4
CTTN-212ENST00000527962 CMASQ8NFW8 434 aaPredicted RBP17.58■□□□□ 0.4
CTTN-212ENST00000527962 TMEM143Q96AN5 459 aa17.58■□□□□ 0.4
CTTN-212ENST00000527962 CCDC51Q96ER9 411 aa17.58■□□□□ 0.4
CTTN-212ENST00000527962 RTP3Q9BQQ7 232 aa17.58■□□□□ 0.4
CTTN-212ENST00000527962 DHX33Q9H6R0 707 aaKnown RBP17.58■□□□□ 0.4
CTTN-212ENST00000527962 ZSWIM4Q9H7M6 989 aa17.58■□□□□ 0.4
CTTN-212ENST00000527962 PTPRZ1P23471 2315 aaPredicted RBP17.58■□□□□ 0.4
CTTN-212ENST00000527962 EML1O00423 815 aa17.57■□□□□ 0.4
CTTN-212ENST00000527962 NRP1O14786 923 aa17.57■□□□□ 0.4
CTTN-212ENST00000527962 CCNT1O60563 726 aaKnown RBP17.57■□□□□ 0.4
CTTN-212ENST00000527962 DDHD2O94830 711 aa17.57■□□□□ 0.4
CTTN-212ENST00000527962 TOB2Q14106 344 aaPredicted RBP17.57■□□□□ 0.4
CTTN-212ENST00000527962 TFDP1Q14186 410 aa17.57■□□□□ 0.4
CTTN-212ENST00000527962 EPHA7Q15375 998 aa17.57■□□□□ 0.4
CTTN-212ENST00000527962 SLFN12Q8IYM2 578 aa17.57■□□□□ 0.4
CTTN-212ENST00000527962 NKD2Q969F2 451 aaPredicted RBP17.57■□□□□ 0.4
CTTN-212ENST00000527962 RPS6KC1Q96S38 1066 aa17.57■□□□□ 0.4
CTTN-212ENST00000527962 VN1R3Q9BXE9 311 aa17.57■□□□□ 0.4
CTTN-212ENST00000527962 TRIM6Q9C030 488 aaPredicted RBP17.57■□□□□ 0.4
CTTN-212ENST00000527962 KCNK12Q9HB15 430 aa17.57■□□□□ 0.4
CTTN-212ENST00000527962 KCNMB3Q9NPA1 279 aa17.57■□□□□ 0.4
CTTN-212ENST00000527962 VAV3Q9UKW4 847 aa17.57■□□□□ 0.4
CTTN-212ENST00000527962 KMT2EQ8IZD2 1858 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 C2CD2LO14523 706 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 SLC37A4O43826 429 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 GLUD1P00367 558 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 RFX1P22670 979 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 HOXA11P31270 313 aaPredicted RBP17.56■□□□□ 0.4
CTTN-212ENST00000527962 OR1G1P47890 313 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 GLUD2P49448 558 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 STK3Q13188 491 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 EMC2Q15006 297 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 XKR9Q5GH70 373 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 NOTUMQ6P988 496 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 FERMT3Q86UX7 667 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 MTRQ99707 1265 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 LXNQ9BS40 222 aa17.56■□□□□ 0.4
CTTN-212ENST00000527962 RHOBTB2Q9BYZ6 727 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms