RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 MAEAQ7L5Y9 396 aa36.61■■■■□ 3.45
SSSCA1-205ENST00000527920 SLC39A11Q8N1S5 342 aa36.61■■■■□ 3.45
SSSCA1-205ENST00000527920 GADD45GIP1Q8TAE8 222 aaPredicted RBP36.61■■■■□ 3.45
SSSCA1-205ENST00000527920 PRIMPOLQ96LW4 560 aa36.61■■■■□ 3.45
SSSCA1-205ENST00000527920 CSRNP2Q9H175 543 aa36.61■■■■□ 3.45
SSSCA1-205ENST00000527920 UBN1Q9NPG3 1134 aa36.61■■■■□ 3.45
SSSCA1-205ENST00000527920 TBC1D13Q9NVG8 400 aa36.61■■■■□ 3.45
SSSCA1-205ENST00000527920 PLXNA4Q9HCM2 1894 aa36.6■■■■□ 3.45
SSSCA1-205ENST00000527920 FSD2A1L4K1 749 aa36.6■■■■□ 3.45
SSSCA1-205ENST00000527920 LRRIQ4A6NIV6 560 aa36.6■■■■□ 3.45
SSSCA1-205ENST00000527920 ALDH7A1P49419 539 aaKnown RBP36.6■■■■□ 3.45
SSSCA1-205ENST00000527920 KRT17Q04695 432 aa36.6■■■■□ 3.45
SSSCA1-205ENST00000527920 KCTD17Q8N5Z5 321 aa36.6■■■■□ 3.45
SSSCA1-205ENST00000527920 C2orf40Q9H1Z8 148 aa36.6■■■■□ 3.45
SSSCA1-205ENST00000527920 RSAD1Q9HA92 442 aa36.6■■■■□ 3.45
SSSCA1-205ENST00000527920 CSPG5O95196 566 aa36.59■■■■□ 3.45
SSSCA1-205ENST00000527920 ARF4P18085 180 aaPredicted RBP36.59■■■■□ 3.45
SSSCA1-205ENST00000527920 LTBRP36941 435 aa36.59■■■■□ 3.45
SSSCA1-205ENST00000527920 FAM187BQ17R55 369 aa36.59■■■■□ 3.45
SSSCA1-205ENST00000527920 ADGRD2Q7Z7M1 963 aa36.59■■■■□ 3.45
SSSCA1-205ENST00000527920 ZBTB8OSQ8IWT0 167 aa36.59■■■■□ 3.45
SSSCA1-205ENST00000527920 EFHBQ8N7U6 833 aa36.59■■■■□ 3.45
SSSCA1-205ENST00000527920 DNM3Q9UQ16 869 aa36.59■■■■□ 3.45
SSSCA1-205ENST00000527920 PBX3P40426 434 aa36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 NAMPTP43490 491 aa36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 BCAR1P56945 870 aa36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 ADAM15Q13444 863 aa36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 PPP2R5AQ15172 486 aa36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 LONRF3Q496Y0 759 aa36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 SMG8Q8ND04 991 aaKnown RBP36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 URGCPQ8TCY9 931 aa36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 KIFAP3Q92845 792 aa36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 MMTAG2Q9BU76 263 aaKnown RBP36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 NGRNQ9NPE2 291 aaKnown RBP36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 PRMT7Q9NVM4 692 aaPredicted RBP36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 KANSL3Q9P2N6 904 aa36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 IPPQ9Y573 584 aa36.58■■■■□ 3.45
SSSCA1-205ENST00000527920 PP2D1A8MPX8 630 aa36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 H3BQ06 376 aaPredicted RBP36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 INPPL1O15357 1258 aa36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 EYA4O95677 639 aa36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 BMP15O95972 392 aa36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 ERVFC1P60507 584 aa36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 PTCRAQ6ISU1 281 aaPredicted RBP36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 MICAL1Q8TDZ2 1067 aa36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 INTS4Q96HW7 963 aaKnown RBP36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 CPB2Q96IY4 423 aa36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 CDCA3Q99618 268 aaPredicted RBP36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 EIF2AQ9BY44 585 aaKnown RBP36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 FZD8Q9H461 694 aa36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 DAXXQ9UER7 740 aaPredicted RBP36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 INPP5FQ9Y2H2 1132 aa36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 BDP1A6H8Y1 2624 aa36.57■■■■□ 3.44
SSSCA1-205ENST00000527920 A0A1B0GUA9 196 aa36.56■■■■□ 3.44
SSSCA1-205ENST00000527920 GRXCR2A6NFK2 248 aa36.56■■■■□ 3.44
SSSCA1-205ENST00000527920 GTF2F1P35269 517 aaKnown RBP eCLIP36.56■■■■□ 3.44
SSSCA1-205ENST00000527920 HYIQ5T013 277 aa36.56■■■■□ 3.44
SSSCA1-205ENST00000527920 BSNDQ8WZ55 320 aa36.56■■■■□ 3.44
SSSCA1-205ENST00000527920 NECAB3Q96P71 396 aaPredicted RBP36.56■■■■□ 3.44
SSSCA1-205ENST00000527920 NRDE2Q9H7Z3 1164 aa36.56■■■■□ 3.44
SSSCA1-205ENST00000527920 FAM50BQ9Y247 325 aa36.56■■■■□ 3.44
SSSCA1-205ENST00000527920 ZC3H11AO75152 810 aaKnown RBP eCLIP36.55■■■■□ 3.44
SSSCA1-205ENST00000527920 ITGA4P13612 1032 aa36.55■■■■□ 3.44
SSSCA1-205ENST00000527920 RNASELQ05823 741 aaKnown RBP36.55■■■■□ 3.44
SSSCA1-205ENST00000527920 SLC27A1Q6PCB7 646 aa36.55■■■■□ 3.44
SSSCA1-205ENST00000527920 EP400NLQ6ZTU2 488 aa36.55■■■■□ 3.44
SSSCA1-205ENST00000527920 IGFLR1Q9H665 355 aa36.55■■■■□ 3.44
SSSCA1-205ENST00000527920 PCDHGC5Q9Y5F6 944 aa36.55■■■■□ 3.44
SSSCA1-205ENST00000527920 TCF20Q9UGU0 1960 aaKnown RBP36.55■■■■□ 3.44
SSSCA1-205ENST00000527920 B4GALT5O43286 388 aa36.54■■■■□ 3.44
SSSCA1-205ENST00000527920 CDC25AP30304 524 aa36.54■■■■□ 3.44
SSSCA1-205ENST00000527920 NRIP1P48552 1158 aa36.54■■■■□ 3.44
SSSCA1-205ENST00000527920 HACE1Q8IYU2 909 aa36.54■■■■□ 3.44
SSSCA1-205ENST00000527920 TCF25Q9BQ70 676 aa36.54■■■■□ 3.44
SSSCA1-205ENST00000527920 TLE6Q9H808 572 aa36.54■■■■□ 3.44
SSSCA1-205ENST00000527920 ZMYM2Q9UBW7 1377 aa36.53■■■■□ 3.44
SSSCA1-205ENST00000527920 TBX10O75333 385 aa36.53■■■■□ 3.44
SSSCA1-205ENST00000527920 TMEM169Q96HH4 297 aa36.53■■■■□ 3.44
SSSCA1-205ENST00000527920 IFT74Q96LB3 600 aa36.53■■■■□ 3.44
SSSCA1-205ENST00000527920 AK8Q96MA6 479 aa36.53■■■■□ 3.44
SSSCA1-205ENST00000527920 TRIM6Q9C030 488 aaPredicted RBP36.53■■■■□ 3.44
SSSCA1-205ENST00000527920 NT5C3AQ9H0P0 336 aa36.53■■■■□ 3.44
SSSCA1-205ENST00000527920 VWA3AA6NCI4 1184 aa36.52■■■■□ 3.44
SSSCA1-205ENST00000527920 SLC26A4O43511 780 aa36.52■■■■□ 3.44
SSSCA1-205ENST00000527920 GALTP07902 379 aa36.52■■■■□ 3.44
SSSCA1-205ENST00000527920 EFNA5P52803 228 aa36.52■■■■□ 3.44
SSSCA1-205ENST00000527920 DLX2Q07687 328 aaPredicted RBP36.52■■■■□ 3.44
SSSCA1-205ENST00000527920 MAPK6Q16659 721 aa36.52■■■■□ 3.44
SSSCA1-205ENST00000527920 DEPTORQ8TB45 409 aa36.52■■■■□ 3.44
SSSCA1-205ENST00000527920 CCDC113Q9H0I3 377 aa36.52■■■■□ 3.44
SSSCA1-205ENST00000527920 ENTPD7Q9NQZ7 604 aa36.52■■■■□ 3.44
SSSCA1-205ENST00000527920 GIT1Q9Y2X7 761 aa36.52■■■■□ 3.44
SSSCA1-205ENST00000527920 E9PMD0 336 aa36.51■■■■□ 3.44
SSSCA1-205ENST00000527920 LINC01565O15544 149 aa36.51■■■■□ 3.44
SSSCA1-205ENST00000527920 DUSP6Q16828 381 aa36.51■■■■□ 3.44
SSSCA1-205ENST00000527920 IGSF21Q96ID5 467 aa36.51■■■■□ 3.44
SSSCA1-205ENST00000527920 TMEM175Q9BSA9 504 aa36.51■■■■□ 3.44
SSSCA1-205ENST00000527920 STK39Q9UEW8 545 aa36.51■■■■□ 3.44
SSSCA1-205ENST00000527920 VPS37CA5D8V6 355 aaPredicted RBP36.5■■■■□ 3.43
SSSCA1-205ENST00000527920 K7ELQ4 463 aaPredicted RBP36.5■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms