RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 STK36Q9NRP7 1315 aa11.83□□□□□ -0.52
CPSF1-203ENST00000527916 WDR64B1ANS9 1081 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 NARSO43776 548 aaKnown RBP11.82□□□□□ -0.52
CPSF1-203ENST00000527916 KINO60870 393 aaKnown RBP11.82□□□□□ -0.52
CPSF1-203ENST00000527916 SRFP11831 508 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 XBP1P17861 261 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 GBP2P32456 591 aaPredicted RBP11.82□□□□□ -0.52
CPSF1-203ENST00000527916 RNASELQ05823 741 aaKnown RBP11.82□□□□□ -0.52
CPSF1-203ENST00000527916 STK3Q13188 491 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 PHLDB3Q6NSJ2 640 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 EFCAB12Q6NXP0 572 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 GLB1LQ6UWU2 654 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 CYP26C1Q6V0L0 522 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 DCLK2Q8N568 766 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 RDM1Q8NG50 284 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 SECISBP2LQ93073 1101 aaKnown RBP11.82□□□□□ -0.52
CPSF1-203ENST00000527916 FAM167AQ96KS9 214 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 MBOAT7Q96N66 472 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 PHF20Q9BVI0 1012 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 ADAMTS10Q9H324 1103 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 TPCN1Q9ULQ1 816 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 CA14Q9ULX7 337 aa11.82□□□□□ -0.52
CPSF1-203ENST00000527916 CENPBP07199 599 aaPredicted RBP11.81□□□□□ -0.52
CPSF1-203ENST00000527916 DCNP07585 359 aaKnown RBP11.81□□□□□ -0.52
CPSF1-203ENST00000527916 SKIP12755 728 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 CLCN3P51790 818 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 CLCN4P51793 760 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 JAK3P52333 1124 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 PTPN14Q15678 1187 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 KIAA0319Q5VV43 1072 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 B3GNT9Q6UX72 402 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 TRMT1LQ7Z2T5 733 aaKnown RBP11.81□□□□□ -0.52
CPSF1-203ENST00000527916 KRT25Q7Z3Z0 450 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 SLC44A3Q8N4M1 653 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 CMASQ8NFW8 434 aaPredicted RBP11.81□□□□□ -0.52
CPSF1-203ENST00000527916 TEKT3Q9BXF9 490 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 CHST12Q9NRB3 414 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 DISC1Q9NRI5 854 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 NRBP2Q9NSY0 501 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 NCDNQ9UBB6 729 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 EPS15L1Q9UBC2 864 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 GABBR1Q9UBS5 961 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 SAMM50Q9Y512 469 aa11.81□□□□□ -0.52
CPSF1-203ENST00000527916 C2orf16Q68DN1 1984 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 GAS7O60861 476 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 PSMD10O75832 226 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 GALTP07902 379 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 DARSP14868 501 aaKnown RBP11.8□□□□□ -0.52
CPSF1-203ENST00000527916 AK2P54819 239 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 CDC42EP1Q00587 391 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 NOMO2Q5JPE7 1267 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 LRCH2Q5VUJ6 765 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 PPP4R3AQ6IN85 833 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 TMEM173Q86WV6 379 aaPredicted RBP11.8□□□□□ -0.52
CPSF1-203ENST00000527916 SUMF1Q8NBK3 374 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 NLRP7Q8WX94 980 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 RSAD2Q8WXG1 361 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 WASF1Q92558 559 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 SHDQ96IW2 340 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 AIFM3Q96NN9 605 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 KLHL5Q96PQ7 755 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 NRDE2Q9H7Z3 1164 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 WDR6Q9NNW5 1121 aaKnown RBP11.8□□□□□ -0.52
CPSF1-203ENST00000527916 ARHGEF3Q9NR81 526 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 MRPL17Q9NRX2 175 aaKnown RBP11.8□□□□□ -0.52
CPSF1-203ENST00000527916 TBC1D13Q9NVG8 400 aa11.8□□□□□ -0.52
CPSF1-203ENST00000527916 CCDC195A0A1B0GUA6 201 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 PRR5-ARHGAP8B1AHC4 643 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 SPTLC1O15269 473 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 ZNF862O60290 1169 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 CTDNEP1O95476 244 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 CNPP09543 421 aaKnown RBP11.79□□□□□ -0.52
CPSF1-203ENST00000527916 PHKA2P46019 1235 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 GPC3P51654 580 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 ARHGAP8P85298 464 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 ZNF528Q3MIS6 628 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 VARS2Q5ST30 1063 aaKnown RBP11.79□□□□□ -0.52
CPSF1-203ENST00000527916 TWF2Q6IBS0 349 aaKnown RBP11.79□□□□□ -0.52
CPSF1-203ENST00000527916 DCLRE1AQ6PJP8 1040 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 LRRC71Q8N4P6 559 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 LINC01465Q8N7H1 131 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 ETNPPLQ8TBG4 499 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 GPR152Q8TDT2 470 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 FAM20AQ96MK3 541 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 NAP1L4Q99733 375 aaKnown RBP11.79□□□□□ -0.52
CPSF1-203ENST00000527916 TRAIPQ9BWF2 469 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 NIFKQ9BYG3 293 aaKnown RBP11.79□□□□□ -0.52
CPSF1-203ENST00000527916 RHOBTB2Q9BYZ6 727 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 GCOM2Q9BZD3 368 aaPredicted RBP11.79□□□□□ -0.52
CPSF1-203ENST00000527916 GBP3Q9H0R5 595 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 UNC45AQ9H3U1 944 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 DLGAP2Q9P1A6 1054 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 CDV3Q9UKY7 258 aaKnown RBP11.79□□□□□ -0.52
CPSF1-203ENST00000527916 SSX2IPQ9Y2D8 614 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 INPP5FQ9Y2H2 1132 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 CLUHO75153 1309 aa11.79□□□□□ -0.52
CPSF1-203ENST00000527916 N4BP1O75113 896 aaKnown RBP11.78□□□□□ -0.52
CPSF1-203ENST00000527916 TDP2O95551 362 aa11.78□□□□□ -0.52
CPSF1-203ENST00000527916 OATP04181 439 aa11.78□□□□□ -0.52
CPSF1-203ENST00000527916 SSBP05455 408 aaKnown RBP eCLIP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms