RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 KCTD2Q14681 263 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 CNGA2Q16280 664 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 CFAP157Q5JU67 520 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 C6orf118Q5T5N4 469 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 DENND2CQ68D51 928 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 LRP10Q7Z4F1 713 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 ZNF654Q8IZM8 581 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 FITM2Q8N6M3 262 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 ZNF713Q8N859 430 aaPredicted RBP8.04□□□□□ -1.12
SOX6-208ENST00000527619 KIAA1958Q8N8K9 716 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 UTP4Q969X6 686 aaKnown RBP8.04□□□□□ -1.12
SOX6-208ENST00000527619 FAM136AQ96C01 138 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 ZNF653Q96CK0 615 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 SCYL1Q96KG9 808 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 NLRP3Q96P20 1036 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 PUS3Q9BZE2 481 aaKnown RBP8.04□□□□□ -1.12
SOX6-208ENST00000527619 PDGFDQ9GZP0 370 aaPredicted RBP8.04□□□□□ -1.12
SOX6-208ENST00000527619 ZMYND12Q9H0C1 365 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 STMN4Q9H169 189 aaPredicted RBP8.04□□□□□ -1.12
SOX6-208ENST00000527619 TXLNGQ9NUQ3 528 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 HESX1Q9UBX0 185 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 AMACRQ9UHK6 382 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 ZNF652Q9Y2D9 606 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 COL4A3BPQ9Y5P4 624 aa8.04□□□□□ -1.12
SOX6-208ENST00000527619 HTR3EA5X5Y0 456 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 NKRFO15226 690 aaKnown RBP eCLIP8.03□□□□□ -1.12
SOX6-208ENST00000527619 UNC5CO95185 931 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 MCM7P33993 719 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 TNNI2P48788 182 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 TUFMP49411 452 aaKnown RBP8.03□□□□□ -1.12
SOX6-208ENST00000527619 IFI35P80217 286 aaPredicted RBP8.03□□□□□ -1.12
SOX6-208ENST00000527619 MAN2A1Q16706 1144 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 MUM1Q2TAK8 710 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 FOXB2Q5VYV0 432 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 ARL6IP4Q66PJ3 421 aaKnown RBP8.03□□□□□ -1.12
SOX6-208ENST00000527619 CCBE1Q6UXH8 406 aaPredicted RBP8.03□□□□□ -1.12
SOX6-208ENST00000527619 MFSD6Q6ZSS7 791 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 ZNF804AQ7Z570 1209 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 LONP2Q86WA8 852 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 RBBP8NLQ8NC74 664 aaPredicted RBP8.03□□□□□ -1.12
SOX6-208ENST00000527619 SLC17A8Q8NDX2 589 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 JDP2Q8WYK2 163 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 ANKS1AQ92625 1134 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 ERP27Q96DN0 273 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 ZKSCAN3Q9BRR0 538 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 FAM192AQ9GZU8 254 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 DPH5Q9H2P9 285 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 EPB41L4BQ9H329 900 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 ETNK1Q9HBU6 452 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 FGFR1OP2Q9NVK5 253 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 SLC4A4Q9Y6R1 1079 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 MYH4Q9Y623 1939 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 IQCA1LA6NCM1 817 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 BTNL10A8MVZ5 291 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 TCP11X1B4DZS4 312 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 PRPF3O43395 683 aaKnown RBP8.03□□□□□ -1.12
SOX6-208ENST00000527619 UBE3CQ15386 1083 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 ZNF790Q6PG37 636 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 TAOK1Q7L7X3 1001 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 AGGF1Q8N302 714 aaeCLIP8.03□□□□□ -1.12
SOX6-208ENST00000527619 ESX1Q8N693 406 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 ABTB2Q8N961 1025 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 SYN2Q92777 582 aaPredicted RBP8.03□□□□□ -1.12
SOX6-208ENST00000527619 SPATA17Q96L03 361 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 NUDCD1Q96RS6 583 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 EIF2AQ9BY44 585 aaKnown RBP8.03□□□□□ -1.12
SOX6-208ENST00000527619 NAPBQ9H115 298 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 PABPC3Q9H361 631 aaKnown RBP8.03□□□□□ -1.12
SOX6-208ENST00000527619 VCX3AQ9NNX9 186 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 PRKAG3Q9UGI9 489 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 CIDEBQ9UHD4 219 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 TACC3Q9Y6A5 838 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 ABCB11O95342 1321 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 ADAMTS7Q9UKP4 1686 aa8.03□□□□□ -1.12
SOX6-208ENST00000527619 PHLPP1O60346 1717 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 ATP5HO75947 161 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 NFKBIAP25963 317 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 PTDSS1P48651 473 aaKnown RBP8.02□□□□□ -1.13
SOX6-208ENST00000527619 HLFQ16534 295 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 SLC18A3Q16572 532 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 CEP128Q6ZU80 1094 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 PNPLA7Q6ZV29 1317 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 SH3TC2Q8TF17 1288 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 ATP8B4Q8TF62 1192 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 USP6NLQ92738 828 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 NDNQ99608 321 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 CCT7Q99832 543 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 TIPINQ9BVW5 301 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 ATP8A2Q9NTI2 1148 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 KBTBD4Q9NVX7 518 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 LRCH1Q9Y2L9 728 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 AHDC1Q5TGY3 1603 aaPredicted RBP8.02□□□□□ -1.13
SOX6-208ENST00000527619 RTL9Q8NET4 1388 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 SPATA31A3Q5VYP0 1347 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 ZNF532Q9HCE3 1301 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 SMIM23A6NLE4 172 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 LMNAP02545 664 aaKnown RBP8.02□□□□□ -1.13
SOX6-208ENST00000527619 CBLBQ13191 982 aa8.02□□□□□ -1.13
SOX6-208ENST00000527619 SUZ12Q15022 739 aaKnown RBP8.02□□□□□ -1.13
SOX6-208ENST00000527619 NPY5RQ15761 445 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms