RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 SPECC1Q5M775 1068 aa14.77□□□□□ -0.05
CAPN1-209ENST00000527469 CDCA2Q69YH5 1023 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-209ENST00000527469 APBB1IPQ7Z5R6 666 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-209ENST00000527469 GPBP1Q86WP2 473 aa14.77□□□□□ -0.05
CAPN1-209ENST00000527469 THNSL1Q8IYQ7 743 aa14.77□□□□□ -0.05
CAPN1-209ENST00000527469 SYT2Q8N9I0 419 aaPredicted RBP14.77□□□□□ -0.05
CAPN1-209ENST00000527469 SLC17A8Q8NDX2 589 aa14.77□□□□□ -0.05
CAPN1-209ENST00000527469 BSNDQ8WZ55 320 aa14.77□□□□□ -0.05
CAPN1-209ENST00000527469 SYMPKQ92797 1274 aaKnown RBP14.77□□□□□ -0.05
CAPN1-209ENST00000527469 LPPQ93052 612 aa14.77□□□□□ -0.05
CAPN1-209ENST00000527469 CLIC6Q96NY7 704 aa14.77□□□□□ -0.05
CAPN1-209ENST00000527469 KMT5AQ9NQR1 393 aa14.77□□□□□ -0.05
CAPN1-209ENST00000527469 TYW1Q9NV66 732 aaKnown RBP14.77□□□□□ -0.05
CAPN1-209ENST00000527469 CFAP45Q9UL16 551 aa14.77□□□□□ -0.05
CAPN1-209ENST00000527469 CNTNAP2Q9UHC6 1331 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 K7ERI5 159 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 B4GALT5O43286 388 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 LPXNO60711 386 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 ZNF623O75123 536 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 CSPG5O95196 566 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 ARF4P18085 180 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-209ENST00000527469 POU3F3P20264 500 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-209ENST00000527469 GUCY2CP25092 1073 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 SLC12A3P55017 1021 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 TIGD5Q53EQ6 642 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 NAALADL2Q58DX5 795 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 RRAGBQ5VZM2 374 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 SLC27A1Q6PCB7 646 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 C1orf186Q6ZWK4 172 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 ZNF598Q86UK7 904 aaKnown RBP14.76□□□□□ -0.05
CAPN1-209ENST00000527469 MRPL38Q96DV4 380 aaKnown RBP14.76□□□□□ -0.05
CAPN1-209ENST00000527469 EPSTI1Q96J88 318 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 CASD1Q96PB1 797 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 ADPGKQ9BRR6 497 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 KIFC3Q9BVG8 833 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 CCSER1Q9C0I3 900 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 C17orf75Q9HAS0 396 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 UBN1Q9NPG3 1134 aa14.76□□□□□ -0.05
CAPN1-209ENST00000527469 RBM19Q9Y4C8 960 aaKnown RBP14.76□□□□□ -0.05
CAPN1-209ENST00000527469 COL4A4P53420 1690 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-209ENST00000527469 C5orf67F2Z3F1 127 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 ACKR2O00590 384 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 N4BP3O15049 544 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 TBCAO75347 108 aaKnown RBP14.75□□□□□ -0.05
CAPN1-209ENST00000527469 FAM13AO94988 1023 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 NPTXRO95502 500 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 YEATS4O95619 227 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 ATF7P17544 494 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-209ENST00000527469 NCLP19338 710 aaKnown RBP14.75□□□□□ -0.05
CAPN1-209ENST00000527469 NPTX2P47972 431 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 AMHR2Q16671 573 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 FAM187BQ17R55 369 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 NOMO2Q5JPE7 1267 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 CLLU1OSQ5K130 101 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 ATL3Q6DD88 541 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 PPP4R3CPQ6ZMV5 832 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 CCDC73Q6ZRK6 1079 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 LINC00301Q8NCQ3 95 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 KCNG4Q8TDN1 519 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 LARP4BQ92615 738 aaKnown RBP14.75□□□□□ -0.05
CAPN1-209ENST00000527469 RAD54LQ92698 747 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 P2RX5Q93086 422 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 ZNF558Q96NG5 402 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 APOL6Q9BWW8 343 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 EIF2AQ9BY44 585 aaKnown RBP14.75□□□□□ -0.05
CAPN1-209ENST00000527469 LMAN2LQ9H0V9 348 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 FZD8Q9H461 694 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 ZHX3Q9H4I2 956 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 RSAD1Q9HA92 442 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 ALG13Q9NP73 1137 aaKnown RBP14.75□□□□□ -0.05
CAPN1-209ENST00000527469 STK17AQ9UEE5 414 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 IPPQ9Y573 584 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 MORC2Q9Y6X9 1032 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-209ENST00000527469 RALGAPA2Q2PPJ7 1873 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 NLRC5Q86WI3 1866 aa14.75□□□□□ -0.05
CAPN1-209ENST00000527469 CARNS1A5YM72 827 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 SFI1A8K8P3 1242 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 H0YCG3 227 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 ZC3H11AO75152 810 aaKnown RBP eCLIP14.74□□□□□ -0.05
CAPN1-209ENST00000527469 PLS3P13797 630 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 PPM1AP35813 382 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 STAT6P42226 847 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 ME1P48163 572 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 ALDH7A1P49419 539 aaKnown RBP14.74□□□□□ -0.05
CAPN1-209ENST00000527469 STRN3Q13033 797 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 PKP1Q13835 747 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 MCM6Q14566 821 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 UBXN11Q5T124 520 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 MRPL10Q7Z7H8 261 aaKnown RBP14.74□□□□□ -0.05
CAPN1-209ENST00000527469 CDR2LQ86X02 465 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-209ENST00000527469 KLHL23Q8NBE8 558 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 COLGALT1Q8NBJ5 622 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 PPP2R3CQ969Q6 453 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 FAM193BQ96PV7 902 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-209ENST00000527469 GBP3Q9H0R5 595 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 RNF19AQ9NV58 838 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 LARSQ9P2J5 1176 aaKnown RBP14.74□□□□□ -0.05
CAPN1-209ENST00000527469 KANSL3Q9P2N6 904 aa14.74□□□□□ -0.05
CAPN1-209ENST00000527469 PUF60Q9UHX1 559 aaKnown RBP14.74□□□□□ -0.05
CAPN1-209ENST00000527469 ODF2LQ9ULJ1 636 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms