RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 RTN4RL1Q86UN2 441 aaPredicted RBP13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 EXOC8Q8IYI6 725 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 BPIFA3Q9BQP9 254 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 FAM49AQ9H0Q0 323 aaPredicted RBP13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 RBSNQ9H1K0 784 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 SUGCTQ9HAC7 445 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 SQORQ9Y6N5 450 aa13.99□□□□□ -0.17
SSSCA1-203ENST00000526877 NCOR1O75376 2440 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 FSD2A1L4K1 749 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 FRMD3A2A2Y4 597 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 TMEM150BA6NC51 233 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 SMTNL1A8MU46 457 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 BECN2A8MW95 431 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 RPLP2P05387 115 aaKnown RBP13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 BMP6P22004 513 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 RFC5P40937 340 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 ZNF484Q5JVG2 852 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 FAM26FQ5R3K3 315 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 IER5Q5VY09 327 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 KIAA0319LQ8IZA0 1049 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 NME8Q8N427 588 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 RNF214Q8ND24 703 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 MCPH1Q8NEM0 835 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 DRC1Q96MC2 740 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 TGS1Q96RS0 853 aaKnown RBP13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 CELF4Q9BZC1 486 aaKnown RBP13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 PARVGQ9HBI0 331 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 CBX8Q9HC52 389 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 SEL1LQ9UBV2 794 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 BRWD1Q9NSI6 2320 aa13.98□□□□□ -0.17
SSSCA1-203ENST00000526877 COL1A2P08123 1366 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 VCANP13611 3396 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 GOLGA6L19H0YKK7 550 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 HIP1RO75146 1068 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 KIF20AO95235 890 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 ERCC5P28715 1186 aaPredicted RBP13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 MRE11P49959 708 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 POLGP54098 1239 aaPredicted RBP13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 TPM4P67936 248 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 TMEM62Q0P6H9 643 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 UVSSAQ2YD98 709 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 COBLL1Q53SF7 1204 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 TSHZ1Q6ZSZ6 1077 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 MAEAQ7L5Y9 396 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 CRIPAKQ8N1N5 446 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 MYCT1Q8N699 235 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 LINC01599Q8WXQ3 324 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 JPH2Q9BR39 696 aaPredicted RBP13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 SH2D3AQ9BRG2 576 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 CDHR5Q9HBB8 845 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 ATP6V0A4Q9HBG4 840 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 SLC39A2Q9NP94 309 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 LARSQ9P2J5 1176 aaKnown RBP13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 GDAQ9Y2T3 454 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 TRPV2Q9Y5S1 764 aa13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 COL4A4P53420 1690 aaPredicted RBP13.97□□□□□ -0.17
SSSCA1-203ENST00000526877 COL4A6Q14031 1691 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 SFI1A8K8P3 1242 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 PPP1R3GB7ZBB8 358 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 PSMA7O14818 248 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 UPP2O95045 317 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 C22orf31O95567 290 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 CD52P31358 61 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 PRCPP42785 496 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 EHHADHQ08426 723 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 STK4Q13043 487 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 TARBP2Q15633 366 aaKnown RBP13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 L1TD1Q5T7N2 865 aaKnown RBP13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 FAM102BQ5T8I3 360 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 KLHL10Q6JEL2 608 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 STXBP4Q6ZWJ1 553 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 SFR1Q86XK3 245 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 SMYD4Q8IYR2 804 aaPredicted RBP13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 ADSSL1Q8N142 457 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 ATXN2LQ8WWM7 1075 aaKnown RBP13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 SLC7A3Q8WY07 619 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 KIFAP3Q92845 792 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 DHTKD1Q96HY7 919 aaPredicted RBP13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 C17orf80Q9BSJ5 609 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 MRPL44Q9H9J2 332 aaKnown RBP13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 GRPEL1Q9HAV7 217 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 LMCD1Q9NZU5 365 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 KCNG1Q9UIX4 513 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 PADI3Q9ULW8 664 aa13.96□□□□□ -0.17
SSSCA1-203ENST00000526877 NLRC5Q86WI3 1866 aa13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 IKBKBO14920 756 aa13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 GAS2O43903 313 aaKnown RBP13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 LINC00271P0C7V0 271 aa13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 CD44P16070 742 aaKnown RBP13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 ZNF131P52739 623 aa13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 MYL5Q02045 173 aa13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 TBC1D8BQ0IIM8 1120 aa13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 PAK1Q13153 545 aa13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 EMC2Q15006 297 aa13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 IQCB1Q15051 598 aa13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 ODR4Q5SWX8 454 aa13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 LUZP1Q86V48 1076 aa13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 MICALL1Q8N3F8 863 aa13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 GUF1Q8N442 669 aaKnown RBP13.95□□□□□ -0.18
SSSCA1-203ENST00000526877 AOPEPQ8N6M6 819 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms