RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 SHMT1P34896 483 aa8.61□□□□□ -1.03
BDNF-213ENST00000525950 USP17L24Q0WX57 530 aa8.61□□□□□ -1.03
BDNF-213ENST00000525950 RNF43Q68DV7 783 aa8.61□□□□□ -1.03
BDNF-213ENST00000525950 USP17L6PQ6QN14 398 aa8.61□□□□□ -1.03
BDNF-213ENST00000525950 C1orf186Q6ZWK4 172 aa8.61□□□□□ -1.03
BDNF-213ENST00000525950 CERKQ8TCT0 537 aa8.61□□□□□ -1.03
BDNF-213ENST00000525950 C18orf8Q96DM3 657 aa8.61□□□□□ -1.03
BDNF-213ENST00000525950 FIZ1Q96SL8 496 aa8.61□□□□□ -1.03
BDNF-213ENST00000525950 RUSC1Q9BVN2 902 aa8.61□□□□□ -1.03
BDNF-213ENST00000525950 USP40Q9NVE5 1235 aa8.61□□□□□ -1.03
BDNF-213ENST00000525950 AGAP1Q9UPQ3 857 aa8.61□□□□□ -1.03
BDNF-213ENST00000525950 PCDHA1Q9Y5I3 950 aa8.61□□□□□ -1.03
BDNF-213ENST00000525950 TLDC2A0PJX2 215 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 CLIC2O15247 247 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 ATP2C2O75185 946 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 UBOX5O94941 541 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 ANP32DO95626 131 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 CAV1Q03135 178 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 NFIXQ14938 502 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 SIX1Q15475 284 aaPredicted RBP8.6□□□□□ -1.03
BDNF-213ENST00000525950 MFSD14BQ5SR56 506 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 TTC27Q6P3X3 843 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 BANK1Q8NDB2 785 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 STRA6Q9BX79 667 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 ABCF3Q9NUQ8 709 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 FRMD4BQ9Y2L6 1034 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 RTCBQ9Y3I0 505 aaKnown RBP8.6□□□□□ -1.03
BDNF-213ENST00000525950 KRT13P13646 458 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 CCNB1P14635 433 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 ITIH2P19823 946 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 PDE6BP35913 854 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 GPSM2P81274 684 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 RHBDF2Q6PJF5 856 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 HS2ST1Q7LGA3 356 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 ZNF720Q7Z2F6 126 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 TBC1D1Q86TI0 1168 aaPredicted RBP8.6□□□□□ -1.03
BDNF-213ENST00000525950 SLC13A5Q86YT5 568 aaPredicted RBP8.6□□□□□ -1.03
BDNF-213ENST00000525950 ZDHHC14Q8IZN3 488 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 NSMCE1Q8WV22 266 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 TCP11Q8WWU5 503 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 ZNF622Q969S3 477 aaKnown RBP eCLIP8.6□□□□□ -1.03
BDNF-213ENST00000525950 HSD17B14Q9BPX1 270 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 EIF2AK1Q9BQI3 630 aaKnown RBP8.6□□□□□ -1.03
BDNF-213ENST00000525950 TRIM6Q9C030 488 aaPredicted RBP8.6□□□□□ -1.03
BDNF-213ENST00000525950 BHMT2Q9H2M3 363 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 ECT2Q9H8V3 914 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 NYAP2Q9P242 653 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 GGA1Q9UJY5 639 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 RSPH10B2B2RC85 870 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 KIF3CO14782 793 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 CLTAP09496 248 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 RSPH10BP0C881 870 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 ABCB4P21439 1286 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 MAN1A1P33908 653 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 ZKSCAN8Q15776 578 aaPredicted RBP8.6□□□□□ -1.03
BDNF-213ENST00000525950 PRR16Q569H4 304 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 CFAP61Q8NHU2 1237 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 EPS8L3Q8TE67 593 aaKnown RBP8.6□□□□□ -1.03
BDNF-213ENST00000525950 AGAP11Q8TF27 550 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 C7orf43Q8WVR3 580 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 STAMBPL1Q96FJ0 436 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 PARVGQ9HBI0 331 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 TAS2R14Q9NYV8 317 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 SRP68Q9UHB9 627 aaKnown RBP8.6□□□□□ -1.03
BDNF-213ENST00000525950 LGALS13Q9UHV8 139 aa8.6□□□□□ -1.03
BDNF-213ENST00000525950 MAPK13O15264 365 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 MSH4O15457 936 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 KCNQ2O43526 872 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 ATP5HO75947 161 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 FAM13AO94988 1023 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 MYL7Q01449 175 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 ZNF211Q13398 564 aaPredicted RBP8.59□□□□□ -1.03
BDNF-213ENST00000525950 ACCSLQ4AC99 568 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 CBWD6Q4V339 395 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 CMPK2Q5EBM0 449 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 CBWD3Q5JTY5 395 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 CBWD5Q5RIA9 395 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 VSTM1Q6UX27 236 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 RELL1Q8IUW5 271 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 MAIP1Q8WWC4 291 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 MTFR1LQ9H019 292 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 AGPAT3Q9NRZ7 376 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 TMOD4Q9NZQ9 345 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 ZNF335Q9H4Z2 1342 aaPredicted RBP8.59□□□□□ -1.03
BDNF-213ENST00000525950 E7ENQ6 273 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 MEIS1O00470 390 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 FSCN2O14926 492 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 PPP1R12AO14974 1030 aaPredicted RBP8.59□□□□□ -1.03
BDNF-213ENST00000525950 SLC16A2P36021 539 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 ALDH5A1P51649 535 aaPredicted RBP8.59□□□□□ -1.03
BDNF-213ENST00000525950 KCNA1Q09470 495 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 BFSP1Q12934 665 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 CRY2Q49AN0 593 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 SPDYAQ5MJ70 313 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 PHLDB3Q6NSJ2 640 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 MIGA2Q7L4E1 593 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 SPATA21Q7Z572 469 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 PNMA8AQ86V59 439 aaPredicted RBP8.59□□□□□ -1.03
BDNF-213ENST00000525950 C12orf56Q8IXR9 622 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 AMNQ9BXJ7 453 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms