RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PUS7Q96PZ0 661 aaKnown RBP5.17□□□□□ -1.58
CD44-219ENST00000525685 AGO3Q9H9G7 860 aaKnown RBP5.17□□□□□ -1.58
CD44-219ENST00000525685 VTA1Q9NP79 307 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 DDX56Q9NY93 547 aaKnown RBP5.17□□□□□ -1.58
CD44-219ENST00000525685 SAE1Q9UBE0 346 aaPredicted RBP5.17□□□□□ -1.58
CD44-219ENST00000525685 SRRDQ9UH36 339 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 MAGEL2Q9UJ55 1249 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 USP18Q9UMW8 372 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 ERICH3Q5RHP9 1530 aa5.17□□□□□ -1.58
CD44-219ENST00000525685 SYNJ2O15056 1496 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 FZD7O75084 574 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 HMGB1P09429 215 aaKnown RBP5.16□□□□□ -1.58
CD44-219ENST00000525685 MYBL2P10244 700 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 MSX2P35548 267 aaPredicted RBP5.16□□□□□ -1.58
CD44-219ENST00000525685 GDF5P43026 501 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 ANTXR2P58335 489 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 ADAM15Q13444 863 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 GRM7Q14831 915 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 USP39Q53GS9 565 aaKnown RBP5.16□□□□□ -1.58
CD44-219ENST00000525685 CT83Q5H943 113 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 KLHDC10Q6PID8 442 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 CXorf67Q86X51 503 aaPredicted RBP5.16□□□□□ -1.58
CD44-219ENST00000525685 ZNF808Q8N4W9 903 aaPredicted RBP5.16□□□□□ -1.58
CD44-219ENST00000525685 SHCBP1Q8NEM2 672 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 OR5AN1Q8NGI8 311 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 EXTL1Q92935 676 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 LPPQ93052 612 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 NOL10Q9BSC4 688 aaKnown RBP5.16□□□□□ -1.58
CD44-219ENST00000525685 CCDC8Q9H0W5 538 aaPredicted RBP5.16□□□□□ -1.58
CD44-219ENST00000525685 MTG2Q9H4K7 406 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 TRHDEQ9UKU6 1024 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 EDARQ9UNE0 448 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 WASHC2CQ9Y4E1 1318 aa5.16□□□□□ -1.58
CD44-219ENST00000525685 ADCY7P51828 1080 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 SESN2P58004 480 aaPredicted RBP5.15□□□□□ -1.59
CD44-219ENST00000525685 FOXE3Q13461 319 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 MTMR1Q13613 665 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 RIN1Q13671 783 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 SAFB2Q14151 953 aaKnown RBP eCLIP5.15□□□□□ -1.59
CD44-219ENST00000525685 MYBPC3Q14896 1274 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 ACAP2Q15057 778 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 DGKDQ16760 1214 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 NRN1LQ496H8 165 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 BRDTQ58F21 947 aaPredicted RBP5.15□□□□□ -1.59
CD44-219ENST00000525685 MIIPQ5JXC2 388 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 SYDE2Q5VT97 1194 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 PNMA8AQ86V59 439 aaPredicted RBP5.15□□□□□ -1.59
CD44-219ENST00000525685 RABGGTAQ92696 567 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 NKD2Q969F2 451 aaPredicted RBP5.15□□□□□ -1.59
CD44-219ENST00000525685 EAF2Q96CJ1 260 aaPredicted RBP5.15□□□□□ -1.59
CD44-219ENST00000525685 ZNF503Q96F45 646 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 HIST1H2AHQ96KK5 128 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 SORCS2Q96PQ0 1159 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 HIST1H2AJQ99878 128 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 DNAJC28Q9NX36 388 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 MKS1Q9NXB0 559 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 KCMF1Q9P0J7 381 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 DENND2AQ9ULE3 1009 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 ZBTB21Q9ULJ3 1066 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 MRFAP1Q9Y605 127 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 MYPNQ86TC9 1320 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 CUL7Q14999 1698 aa5.15□□□□□ -1.59
CD44-219ENST00000525685 KIF27Q86VH2 1401 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 CLASP1Q7Z460 1538 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 PRSS38A1L453 326 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 C2orf78A6NCI8 922 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 ELL2O00472 640 aaPredicted RBP5.14□□□□□ -1.59
CD44-219ENST00000525685 CYR61O00622 381 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 DAPK3O43293 454 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 H2AFYO75367 372 aaKnown RBP5.14□□□□□ -1.59
CD44-219ENST00000525685 MT-CO1P00395 513 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 CFBP00751 764 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 SLPIP03973 132 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 LPLP06858 475 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 PDGFRBP09619 1106 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 ATP2C1P98194 919 aaPredicted RBP5.14□□□□□ -1.59
CD44-219ENST00000525685 EXOSC10Q01780 885 aaKnown RBP5.14□□□□□ -1.59
CD44-219ENST00000525685 PPARAQ07869 468 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 KLF1Q13351 362 aaPredicted RBP5.14□□□□□ -1.59
CD44-219ENST00000525685 PDCD1Q15116 288 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 ABCB5Q2M3G0 1257 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 UNQ6494/PRO21346Q6UXR6 183 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 ADGRE4PQ86SQ3 457 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 CMIPQ8IY22 773 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 RPUSD2Q8IZ73 545 aaKnown RBP5.14□□□□□ -1.59
CD44-219ENST00000525685 GFM2Q969S9 779 aaKnown RBP5.14□□□□□ -1.59
CD44-219ENST00000525685 SLC7A6OSQ96CW6 309 aaPredicted RBP5.14□□□□□ -1.59
CD44-219ENST00000525685 DYDC2Q96IM9 177 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 MENTQ9BUN1 341 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 HAPLN2Q9GZV7 340 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 QRSL1Q9H0R6 528 aaKnown RBP5.14□□□□□ -1.59
CD44-219ENST00000525685 TLR9Q9NR96 1032 aa5.14□□□□□ -1.59
CD44-219ENST00000525685 GRIN2AQ12879 1464 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 XPOTO43592 962 aaKnown RBP5.13□□□□□ -1.59
CD44-219ENST00000525685 S100BP04271 92 aaPredicted RBP5.13□□□□□ -1.59
CD44-219ENST00000525685 MTHFD2P13995 350 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 ENPP1P22413 925 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 ACRV1P26436 265 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 MANFP55145 182 aaKnown RBP5.13□□□□□ -1.59
CD44-219ENST00000525685 LGALS4P56470 323 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms