RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PCDHB6Q9Y5E3 794 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 LRRIQ4A6NIV6 560 aa20.59■□□□□ 0.89
CAPN1-203ENST00000525013 H3BQV1 296 aa20.59■□□□□ 0.89
CAPN1-203ENST00000525013 TSPAN1O60635 241 aa20.59■□□□□ 0.89
CAPN1-203ENST00000525013 FXR2P51116 673 aaKnown RBP eCLIP20.59■□□□□ 0.892e-6■□□□□ 10.3
CAPN1-203ENST00000525013 MBTD1Q05BQ5 628 aa20.59■□□□□ 0.89
CAPN1-203ENST00000525013 POU5F1BQ06416 359 aa20.59■□□□□ 0.89
CAPN1-203ENST00000525013 UBXN11Q5T124 520 aa20.59■□□□□ 0.89
CAPN1-203ENST00000525013 NOTUMQ6P988 496 aa20.59■□□□□ 0.89
CAPN1-203ENST00000525013 AGMOQ6ZNB7 445 aa20.59■□□□□ 0.89
CAPN1-203ENST00000525013 MRPL10Q7Z7H8 261 aaKnown RBP20.59■□□□□ 0.89
CAPN1-203ENST00000525013 SLC39A11Q8N1S5 342 aa20.59■□□□□ 0.89
CAPN1-203ENST00000525013 MCPH1Q8NEM0 835 aa20.59■□□□□ 0.89
CAPN1-203ENST00000525013 TMEM169Q96HH4 297 aa20.59■□□□□ 0.89
CAPN1-203ENST00000525013 CD320Q9NPF0 282 aa20.59■□□□□ 0.89
CAPN1-203ENST00000525013 C5orf42Q9H799 3197 aa20.59■□□□□ 0.89
CAPN1-203ENST00000525013 FSCN2O14926 492 aa20.58■□□□□ 0.89
CAPN1-203ENST00000525013 AXLP30530 894 aa20.58■□□□□ 0.89
CAPN1-203ENST00000525013 PADI6Q6TGC4 694 aa20.58■□□□□ 0.89
CAPN1-203ENST00000525013 IFNLR1Q8IU57 520 aaPredicted RBP20.58■□□□□ 0.89
CAPN1-203ENST00000525013 GJD3Q8N144 294 aa20.58■□□□□ 0.89
CAPN1-203ENST00000525013 RAB34Q9BZG1 259 aa20.58■□□□□ 0.89
CAPN1-203ENST00000525013 NRDE2Q9H7Z3 1164 aa20.58■□□□□ 0.89
CAPN1-203ENST00000525013 RSAD1Q9HA92 442 aa20.58■□□□□ 0.89
CAPN1-203ENST00000525013 NGRNQ9NPE2 291 aaKnown RBP20.58■□□□□ 0.89
CAPN1-203ENST00000525013 SMC3Q9UQE7 1217 aa20.58■□□□□ 0.89
CAPN1-203ENST00000525013 ITGA4P13612 1032 aa20.57■□□□□ 0.88
CAPN1-203ENST00000525013 CA8P35219 290 aa20.57■□□□□ 0.88
CAPN1-203ENST00000525013 SMAD4Q13485 552 aaKnown RBP20.57■□□□□ 0.88
CAPN1-203ENST00000525013 PDIA5Q14554 519 aa20.57■□□□□ 0.88
CAPN1-203ENST00000525013 CNNM3Q8NE01 707 aa20.57■□□□□ 0.88
CAPN1-203ENST00000525013 CCDC51Q96ER9 411 aa20.57■□□□□ 0.88
CAPN1-203ENST00000525013 FAM193BQ96PV7 902 aaPredicted RBP20.57■□□□□ 0.88
CAPN1-203ENST00000525013 CDCA3Q99618 268 aaPredicted RBP20.57■□□□□ 0.88
CAPN1-203ENST00000525013 EIF2AQ9BY44 585 aaKnown RBP20.57■□□□□ 0.88
CAPN1-203ENST00000525013 NFKBIZQ9BYH8 718 aa20.57■□□□□ 0.88
CAPN1-203ENST00000525013 TRIM6Q9C030 488 aaPredicted RBP20.57■□□□□ 0.88
CAPN1-203ENST00000525013 CLEC1BQ9P126 229 aa20.57■□□□□ 0.88
CAPN1-203ENST00000525013 BARX2Q9UMQ3 279 aaPredicted RBP20.57■□□□□ 0.88
CAPN1-203ENST00000525013 CNTNAP2Q9UHC6 1331 aa20.56■□□□□ 0.88
CAPN1-203ENST00000525013 HIDE1A8MVS5 230 aa20.56■□□□□ 0.88
CAPN1-203ENST00000525013 MBTPS2O43462 519 aa20.56■□□□□ 0.88
CAPN1-203ENST00000525013 GLP2RO95838 553 aa20.56■□□□□ 0.88
CAPN1-203ENST00000525013 NCLP19338 710 aaKnown RBP20.56■□□□□ 0.88
CAPN1-203ENST00000525013 MUTP22033 750 aa20.56■□□□□ 0.88
CAPN1-203ENST00000525013 RBM10P98175 930 aaKnown RBP20.56■□□□□ 0.88
CAPN1-203ENST00000525013 BMS1Q14692 1282 aaKnown RBP20.56■□□□□ 0.88
CAPN1-203ENST00000525013 DUSP6Q16828 381 aa20.56■□□□□ 0.88
CAPN1-203ENST00000525013 SMG8Q8ND04 991 aaKnown RBP20.56■□□□□ 0.88
CAPN1-203ENST00000525013 SNX29Q8TEQ0 813 aa20.56■□□□□ 0.88
CAPN1-203ENST00000525013 MSLNLQ96KJ4 702 aa20.56■□□□□ 0.88
CAPN1-203ENST00000525013 CSRNP2Q9H175 543 aa20.56■□□□□ 0.88
CAPN1-203ENST00000525013 KANSL3Q9P2N6 904 aa20.56■□□□□ 0.88
CAPN1-203ENST00000525013 KIAA1024Q9UPX6 916 aa20.56■□□□□ 0.88
CAPN1-203ENST00000525013 IPPQ9Y573 584 aa20.56■□□□□ 0.88
CAPN1-203ENST00000525013 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.56■□□□□ 0.88
CAPN1-203ENST00000525013 TDRD15B5MCY1 1934 aaKnown RBP20.55■□□□□ 0.88
CAPN1-203ENST00000525013 FSD2A1L4K1 749 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 CARNS1A5YM72 827 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 LAD1O00515 517 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 B4GALT5O43286 388 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 POMCP01189 267 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 GALTP07902 379 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 ARF4P18085 180 aaPredicted RBP20.55■□□□□ 0.88
CAPN1-203ENST00000525013 CYP11B2P19099 503 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 AFF1P51825 1210 aaKnown RBP20.55■□□□□ 0.88
CAPN1-203ENST00000525013 SMC1AQ14683 1233 aaKnown RBP20.55■□□□□ 0.88
CAPN1-203ENST00000525013 SMAD2Q15796 467 aaKnown RBP20.55■□□□□ 0.88
CAPN1-203ENST00000525013 ECM1Q16610 540 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 AMHR2Q16671 573 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 RILPL1Q5EBL4 403 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 DTHD1Q6ZMT9 781 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 TMEM173Q86WV6 379 aaPredicted RBP20.55■□□□□ 0.88
CAPN1-203ENST00000525013 ZNF280BQ86YH2 543 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 ZBTB8OSQ8IWT0 167 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 APOL6Q9BWW8 343 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 BHMT2Q9H2M3 363 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 RNF39Q9H2S5 420 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 EPHX3Q9H6B9 360 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 UBN1Q9NPG3 1134 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 DDX19AQ9NUU7 478 aaKnown RBP20.55■□□□□ 0.88
CAPN1-203ENST00000525013 DNAJB4Q9UDY4 337 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 PRKAG3Q9UGI9 489 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 HES2Q9Y543 173 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 STK24Q9Y6E0 443 aa20.55■□□□□ 0.88
CAPN1-203ENST00000525013 CXCL14O95715 111 aa20.54■□□□□ 0.88
CAPN1-203ENST00000525013 SLC11A1P49279 550 aa20.54■□□□□ 0.88
CAPN1-203ENST00000525013 ZP2Q05996 745 aa20.54■□□□□ 0.88
CAPN1-203ENST00000525013 KRT79Q5XKE5 535 aa20.54■□□□□ 0.88
CAPN1-203ENST00000525013 LARP1BQ659C4 914 aaKnown RBP20.54■□□□□ 0.88
CAPN1-203ENST00000525013 LLGL2Q6P1M3 1020 aa20.54■□□□□ 0.88
CAPN1-203ENST00000525013 CDR2LQ86X02 465 aaPredicted RBP20.54■□□□□ 0.88
CAPN1-203ENST00000525013 ADHFE1Q8IWW8 467 aa20.54■□□□□ 0.88
CAPN1-203ENST00000525013 HACE1Q8IYU2 909 aa20.54■□□□□ 0.88
CAPN1-203ENST00000525013 VPS52Q8N1B4 723 aa20.54■□□□□ 0.88
CAPN1-203ENST00000525013 IGSF22Q8N9C0 903 aa20.54■□□□□ 0.88
CAPN1-203ENST00000525013 VN1R2Q8NFZ6 395 aa20.54■□□□□ 0.88
CAPN1-203ENST00000525013 KHSRPQ92945 711 aaKnown RBP eCLIP20.54■□□□□ 0.88
CAPN1-203ENST00000525013 IGSF21Q96ID5 467 aa20.54■□□□□ 0.88
CAPN1-203ENST00000525013 POLD4Q9HCU8 107 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms