RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 XKR9Q5GH70 373 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 FERMT3Q86UX7 667 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 PLCD3Q8N3E9 789 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 FBXL6Q8N531 539 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 LPPQ93052 612 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 TMEM143Q96AN5 459 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 MTRQ99707 1265 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 EMILIN2Q9BXX0 1053 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 ANKEF1Q9NU02 776 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 DPP7Q9UHL4 492 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 PCDHA12Q9UN75 941 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 USTQ9Y2C2 406 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 INPP5FQ9Y2H2 1132 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 FAN1Q9Y2M0 1017 aa13.21□□□□□ -0.29
SPARC-206ENST00000524277 DGAT1O75907 488 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 ERLIN2O94905 339 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 SLITRK3O94933 977 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 XRCC6P12956 609 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPARC-206ENST00000524277 HOXA11P31270 313 aaPredicted RBP13.2□□□□□ -0.3
SPARC-206ENST00000524277 PTENP60484 403 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 SPIRE1Q08AE8 756 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 TRIM29Q14134 588 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 ERICH6BQ5W0A0 696 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 NCAPH2Q6IBW4 605 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 KIAA1841Q6NSI8 718 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 ELMSAN1Q6PJG2 1045 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 AGMOQ6ZNB7 445 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 ZBTB33Q86T24 672 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 ALYREFQ86V81 257 aaKnown RBP13.2□□□□□ -0.3
SPARC-206ENST00000524277 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 IFNLR1Q8IU57 520 aaPredicted RBP13.2□□□□□ -0.3
SPARC-206ENST00000524277 TPH2Q8IWU9 490 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 HACE1Q8IYU2 909 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 RNF149Q8NC42 400 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 OXER1Q8TDS5 423 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 DYDC2Q96IM9 177 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 HSD17B14Q9BPX1 270 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 RGL1Q9NZL6 768 aa13.2□□□□□ -0.3
SPARC-206ENST00000524277 WRAP73Q9P2S5 460 aaPredicted RBP13.2□□□□□ -0.3
SPARC-206ENST00000524277 ZDBF2Q9HCK1 2354 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 INPPL1O15357 1258 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 NR1I2O75469 434 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 CTDNEP1O95476 244 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 C1RP00736 705 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 ITGA4P13612 1032 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 SLC11A1P49279 550 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 AK2P54819 239 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 CALCRLQ16602 461 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 NOTUMQ6P988 496 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 CABP7Q86V35 215 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 ZDHHC14Q8IZN3 488 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
SPARC-206ENST00000524277 SLC22A17Q8WUG5 538 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 GTF3C6Q969F1 213 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 CCDC43Q96MW1 224 aaKnown RBP13.19□□□□□ -0.3
SPARC-206ENST00000524277 EIF2AK1Q9BQI3 630 aaKnown RBP13.19□□□□□ -0.3
SPARC-206ENST00000524277 APOL5Q9BWW9 433 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 NFKBIZQ9BYH8 718 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 GBP3Q9H0R5 595 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 MRPL17Q9NRX2 175 aaKnown RBP13.19□□□□□ -0.3
SPARC-206ENST00000524277 SORCS3Q9UPU3 1222 aa13.19□□□□□ -0.3
SPARC-206ENST00000524277 MEIS3P2A8K0S8 358 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 FDPSP14324 419 aaKnown RBP13.18□□□□□ -0.3
SPARC-206ENST00000524277 MRE11P49959 708 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 MTMR3Q13615 1198 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 CTTNQ14247 550 aaKnown RBP13.18□□□□□ -0.3
SPARC-206ENST00000524277 PTPN14Q15678 1187 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 LONRF3Q496Y0 759 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 UBXN11Q5T124 520 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 RARS2Q5T160 578 aaKnown RBP13.18□□□□□ -0.3
SPARC-206ENST00000524277 CYP26C1Q6V0L0 522 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 TMEM173Q86WV6 379 aaPredicted RBP13.18□□□□□ -0.3
SPARC-206ENST00000524277 ZNF280BQ86YH2 543 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 GPR65Q8IYL9 337 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 TNFRSF25Q93038 417 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 ACSF2Q96CM8 615 aaPredicted RBP13.18□□□□□ -0.3
SPARC-206ENST00000524277 ASIC4Q96FT7 647 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 CSRNP2Q9H175 543 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 POMKQ9H5K3 350 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 TTC12Q9H892 705 aaPredicted RBP13.18□□□□□ -0.3
SPARC-206ENST00000524277 MINDY3Q9H8M7 445 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 SFXN1Q9H9B4 322 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 DNAJB4Q9UDY4 337 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 DBR1Q9UK59 544 aaKnown RBP13.18□□□□□ -0.3
SPARC-206ENST00000524277 ZMYM2Q9UBW7 1377 aa13.18□□□□□ -0.3
SPARC-206ENST00000524277 NRP1O14786 923 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 NEMFO60524 1076 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 LILRB3O75022 631 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 DDHD2O94830 711 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 SOD2P04179 222 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 KLRC2P26717 231 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 ARL2P36404 184 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 CYP4A11Q02928 519 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 NR5A1Q13285 461 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 EARS2Q5JPH6 523 aaKnown RBP13.17□□□□□ -0.3
SPARC-206ENST00000524277 C15orf39Q6ZRI6 1047 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 TDRD5Q8NAT2 981 aaKnown RBP13.17□□□□□ -0.3
SPARC-206ENST00000524277 KREMEN2Q8NCW0 462 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 KLHL5Q96PQ7 755 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 RHOBTB2Q9BYZ6 727 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms