RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 SEC24DO94855 1032 aaPredicted RBP5.05□□□□□ -1.6
SKP1-212ENST00000523966 LY86O95711 162 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 KRT1P04264 644 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 KCNC1P48547 511 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 GJA9P57773 515 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 DLX2Q07687 328 aaPredicted RBP5.05□□□□□ -1.6
SKP1-212ENST00000523966 ARHGAP29Q52LW3 1261 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 XP32Q5T750 250 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 TRIM68Q6AZZ1 485 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 USP30Q70CQ3 517 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 GPR155Q7Z3F1 870 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 C14orf80Q86SX3 495 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 PLA2G15Q8NCC3 412 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 RIN2Q8WYP3 895 aaPredicted RBP5.05□□□□□ -1.6
SKP1-212ENST00000523966 NKD2Q969F2 451 aaPredicted RBP5.05□□□□□ -1.6
SKP1-212ENST00000523966 AIFM3Q96NN9 605 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 MAP3K14Q99558 947 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 C7orf25Q9BPX7 421 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 SOX7Q9BT81 388 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 C14orf93Q9H972 538 aaKnown RBP5.05□□□□□ -1.6
SKP1-212ENST00000523966 ADAM29Q9UKF5 820 aa5.05□□□□□ -1.6
SKP1-212ENST00000523966 RBM8AQ9Y5S9 174 aaKnown RBP5.05□□□□□ -1.6
SKP1-212ENST00000523966 ERC2O15083 957 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 GAAP10253 952 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 ECHS1P30084 290 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 ADSLP30566 484 aaPredicted RBP5.04□□□□□ -1.6
SKP1-212ENST00000523966 CSF2RBP32927 897 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 MCAMP43121 646 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 AGBL4Q5VU57 503 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 PPP4R4Q6NUP7 873 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 LARP4Q71RC2 724 aaKnown RBP eCLIP5.04□□□□□ -1.63e-6■□□□□ 10.8
SKP1-212ENST00000523966 TAS1R1Q7RTX1 841 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 KBTBD2Q8IY47 623 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 PPP1R14CQ8TAE6 165 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 TTC8Q8TAM2 541 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 ZSCAN18Q8TBC5 510 aaPredicted RBP5.04□□□□□ -1.6
SKP1-212ENST00000523966 COA7Q96BR5 231 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 SLC7A6OSQ96CW6 309 aaPredicted RBP5.04□□□□□ -1.6
SKP1-212ENST00000523966 UHRF1Q96T88 793 aaPredicted RBP5.04□□□□□ -1.6
SKP1-212ENST00000523966 FDXACB1Q9BRP7 624 aaPredicted RBP5.04□□□□□ -1.6
SKP1-212ENST00000523966 USP40Q9NVE5 1235 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 TUBD1Q9UJT1 453 aa5.04□□□□□ -1.6
SKP1-212ENST00000523966 A0A1W2PR48 441 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 CCDC154A6NI56 674 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
SKP1-212ENST00000523966 CAND2O75155 1236 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 ALDH1A2O94788 518 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 ENDOD1O94919 500 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 ZRANB2O95218 330 aaKnown RBP eCLIP5.03□□□□□ -1.6
SKP1-212ENST00000523966 KRT18P05783 430 aaKnown RBP5.03□□□□□ -1.6
SKP1-212ENST00000523966 POU2F2P09086 479 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 ZNF888P0CJ79 500 aaPredicted RBP5.03□□□□□ -1.6
SKP1-212ENST00000523966 PDCP20941 246 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 CTSSP25774 331 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 KIR2DL3P43628 341 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 SLURP1P55000 103 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 BPIFB4P59827 614 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 HLTFQ14527 1009 aaKnown RBP eCLIP5.03□□□□□ -1.6
SKP1-212ENST00000523966 UBE3CQ15386 1083 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 ZNF124Q15973 351 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 CCDC157Q569K6 752 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 C19orf54Q5BKX5 351 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 SLC4A10Q6U841 1118 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 PLEKHH3Q7Z736 793 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 CLEC14AQ86T13 490 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 ZNF761Q86XN6 746 aaPredicted RBP5.03□□□□□ -1.6
SKP1-212ENST00000523966 GRAMD1CQ8IYS0 662 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 BCL6BQ8N143 479 aaPredicted RBP5.03□□□□□ -1.6
SKP1-212ENST00000523966 CAMKK1Q8N5S9 505 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 SNX33Q8WV41 574 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 DPF2Q92785 391 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 FMNL2Q96PY5 1086 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 KIAA1683Q9H0B3 1180 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 MANSC1Q9H8J5 431 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 JADE2Q9NQC1 790 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 PRDM11Q9NQV5 511 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 NCDNQ9UBB6 729 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 NR2E1Q9Y466 385 aa5.03□□□□□ -1.6
SKP1-212ENST00000523966 VSTM5A8MXK1 200 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 NRP1O14786 923 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 ARHGAP6O43182 974 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 B4GALT4O60513 344 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 CTNND1O60716 968 aaKnown RBP5.02□□□□□ -1.61
SKP1-212ENST00000523966 JUNP05412 331 aaKnown RBP5.02□□□□□ -1.61
SKP1-212ENST00000523966 WASP42768 502 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 WNT3AP56704 352 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 ATP2C1P98194 919 aaPredicted RBP5.02□□□□□ -1.61
SKP1-212ENST00000523966 DUSP2Q05923 314 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 MGAT2Q10469 447 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 THEMIS2Q5TEJ8 643 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 ARHGEF18Q6ZSZ5 1173 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 USP45Q70EL2 814 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 PDZD4Q76G19 769 aaPredicted RBP5.02□□□□□ -1.61
SKP1-212ENST00000523966 TTC7BQ86TV6 843 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 RSPH3Q86UC2 560 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 CCAR1Q8IX12 1150 aaKnown RBP5.02□□□□□ -1.61
SKP1-212ENST00000523966 RHOT1Q8IXI2 618 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 SP8Q8IXZ3 490 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 OR14K1Q8NGZ2 314 aa5.02□□□□□ -1.61
SKP1-212ENST00000523966 ZNF480Q8WV37 535 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms