RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	GPNMB	Q14956	572 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	ZBTB37	Q5TC79	503 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	LARP1B	Q659C4	914 aa	Known RBP	6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	C12orf40	Q86WS4	652 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	KCT2	Q8NC54	265 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	NAP1L4	Q99733	375 aa	Known RBP	6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	RTKN	Q9BST9	563 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	WNT10A	Q9GZT5	417 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	SEMA4A	Q9H3S1	761 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	PHAX	Q9H814	394 aa	Known RBP	6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	TYW1	Q9NV66	732 aa	Known RBP	6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	ADAM30	Q9UKF2	790 aa		6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	6.11	□□□□□ -1.43
PABPC1-223	ENST00000523636	C2CD3	Q4AC94	2353 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636		A0A1B0GUL7	405 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	LDHA	P00338	332 aa	Known RBP	6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	HSP90AA1	P07900	732 aa	Known RBP	6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	FGR	P09769	529 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	DRD2	P14416	443 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	HIBADH	P31937	336 aa	Known RBP	6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	CHRNA4	P43681	627 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	PREP	P48147	710 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	NASP	P49321	788 aa	Predicted RBP	6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	CASP7	P55210	303 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	TMEM201	Q5SNT2	666 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	ZKSCAN2	Q63HK3	967 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	GET4	Q7L5D6	327 aa	Predicted RBP	6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	DYM	Q7RTS9	669 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	DPP9	Q86TI2	863 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	CD163	Q86VB7	1156 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	CCDC105	Q8IYK2	499 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	PRPF38A	Q8NAV1	312 aa	Known RBP	6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	ZNF507	Q8TCN5	953 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	SLC39A13	Q96H72	371 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	MRFAP1L1	Q96HT8	127 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	GLT1D1	Q96MS3	346 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	UBL7	Q96S82	380 aa	Predicted RBP	6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	MPHOSPH8	Q99549	860 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	HAUS7	Q99871	368 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	IER2	Q9BTL4	223 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	YIPF2	Q9BWQ6	316 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	IDI2	Q9BXS1	227 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	ACTL7B	Q9Y614	415 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	PARP14	Q460N5	1801 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	FBN3	Q75N90	2809 aa		6.1	□□□□□ -1.43
PABPC1-223	ENST00000523636	PRAMEF27	A3QJZ7	478 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	GAS2	O43903	313 aa	Known RBP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	FRAT2	O75474	233 aa	Predicted RBP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	GLRX3	O76003	335 aa	Known RBP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	ZRANB2	O95218	330 aa	Known RBP eCLIP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	HTR3B	O95264	441 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	MCM4	P33991	863 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	NTF4	P34130	210 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	CAP2	P40123	477 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	ASPA	P45381	313 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	CLCN5	P51795	746 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	RRP1	P56182	461 aa	Known RBP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	WDR5	P61964	334 aa	Known RBP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	POU5F1B	Q06416	359 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	LRRFIP1	Q32MZ4	808 aa	Known RBP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	TIGD5	Q53EQ6	642 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	ICE2	Q659A1	982 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	MCF2L2	Q86YR7	1114 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	RBBP8NL	Q8NC74	664 aa	Predicted RBP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	SMRP1	Q8NCR6	262 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	EZH1	Q92800	747 aa	Predicted RBP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	MEGF10	Q96KG7	1140 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	MYRFL	Q96LU7	910 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	MPHOSPH6	Q99547	160 aa	Known RBP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	SSBP4	Q9BWG4	385 aa	Predicted RBP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	PLA2G12B	Q9BX93	195 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	MOV10L1	Q9BXT6	1211 aa	Known RBP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	OSBPL5	Q9H0X9	879 aa	Predicted RBP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	NSUN3	Q9H649	340 aa	Known RBP	6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	ACSS3	Q9H6R3	686 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	PIDD1	Q9HB75	910 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	PARD6A	Q9NPB6	346 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	USP40	Q9NVE5	1235 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	CLEC1B	Q9P126	229 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	CD207	Q9UJ71	328 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	PCDHB14	Q9Y5E9	798 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	SCIN	Q9Y6U3	715 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	NOTCH2	Q04721	2471 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	CSMD1	Q96PZ7	3565 aa		6.09	□□□□□ -1.43
PABPC1-223	ENST00000523636	SPEN	Q96T58	3664 aa	Known RBP	6.09	□□□□□ -1.44
PABPC1-223	ENST00000523636	MAST3	O60307	1309 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	KIF28P	B7ZC32	967 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	ENTPD3	O75355	529 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	GJB5	O95377	273 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	FGA	P02671	866 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	PFKM	P08237	780 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	CYP2C9	P11712	490 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	AKR1A1	P14550	325 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	SDHB	P21912	280 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	PTGS1	P23219	599 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	DEK	P35659	375 aa	Known RBP	6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	GNAL	P38405	381 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	USP11	P51784	963 aa		6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	ETF1	P62495	437 aa	Known RBP	6.08	□□□□□ -1.44
PABPC1-223	ENST00000523636	ZNF200	P98182	395 aa	Predicted RBP	6.08	□□□□□ -1.44

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