RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 PDXKO00764 312 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 FGFR1OPO95684 399 aaKnown RBP10.23□□□□□ -0.77
SDCBP-212ENST00000523483 ACOT2P49753 483 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 GTF2BQ00403 316 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 PRPF4BQ13523 1007 aaKnown RBP10.23□□□□□ -0.77
SDCBP-212ENST00000523483 FILIP1LQ4L180 1135 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 THNSL1Q8IYQ7 743 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 NAP1L5Q96NT1 182 aaPredicted RBP10.23□□□□□ -0.77
SDCBP-212ENST00000523483 NOC4LQ9BVI4 516 aaKnown RBP10.23□□□□□ -0.77
SDCBP-212ENST00000523483 HSD3B7Q9H2F3 369 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 ARHGAP28Q9P2N2 729 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 COL1A2P08123 1366 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 ZMYM2Q9UBW7 1377 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 IGKV6-21A0A0C4DH24 114 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 EPB41P11171 864 aaKnown RBP10.23□□□□□ -0.77
SDCBP-212ENST00000523483 KRT31Q15323 416 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 UVSSAQ2YD98 709 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 TCP11X2Q5H9J9 407 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 FAM213AQ9BRX8 229 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 TMEM106CQ9BVX2 250 aa10.23□□□□□ -0.77
SDCBP-212ENST00000523483 TRIP12Q14669 1992 aaPredicted RBP10.22□□□□□ -0.77
SDCBP-212ENST00000523483 GRIN2DO15399 1336 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 H0YCG3 227 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 CLDN3O15551 220 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 AKAP3O75969 853 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 TPM3P06753 285 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 DLATP10515 647 aaKnown RBP10.22□□□□□ -0.77
SDCBP-212ENST00000523483 GPC3P51654 580 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 ALCAMQ13740 583 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 TAS1R3Q7RTX0 852 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 RSPH3Q86UC2 560 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 GPIHBP1Q8IV16 184 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 MAP4K3Q8IVH8 894 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 FAM114A1Q8IWE2 563 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 SLC17A8Q8NDX2 589 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 WNT8BQ93098 351 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 TUBGCP2Q9BSJ2 902 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 CRACR2AQ9BSW2 395 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 APOL6Q9BWW8 343 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 HSPBP1Q9NZL4 362 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 LAMA2P24043 3122 aaKnown RBP10.22□□□□□ -0.77
SDCBP-212ENST00000523483 CEP290O15078 2479 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 MOXD2PA6NHM9 499 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 EDN1P05305 212 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 IQCF3P0C7M6 154 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 RTP1P59025 263 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 UBXN1Q04323 297 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 ZNF568Q3ZCX4 644 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 FAM186BQ8IYM0 893 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 DIS3LQ8TF46 1054 aaKnown RBP10.22□□□□□ -0.77
SDCBP-212ENST00000523483 CPLX3Q8WVH0 158 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 FAM84AQ96KN4 292 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 MSTO1Q9BUK6 570 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 MRPL4Q9BYD3 311 aaKnown RBP10.22□□□□□ -0.77
SDCBP-212ENST00000523483 GCOM2Q9BZD3 368 aaPredicted RBP10.22□□□□□ -0.77
SDCBP-212ENST00000523483 ARMCX3Q9UH62 379 aaPredicted RBP10.22□□□□□ -0.77
SDCBP-212ENST00000523483 KCNG1Q9UIX4 513 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 THSD7BQ9C0I4 1608 aa10.22□□□□□ -0.77
SDCBP-212ENST00000523483 PPP1R37O75864 691 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 TRIM49P0CI25 452 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 TRIM49CP0CI26 452 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 EFNA5P52803 228 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 PTENP60484 403 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 CBWD2Q8IUF1 395 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 NTPCRQ9BSD7 190 aaKnown RBP10.21□□□□□ -0.77
SDCBP-212ENST00000523483 TRIM6Q9C030 488 aaPredicted RBP10.21□□□□□ -0.77
SDCBP-212ENST00000523483 C2orf40Q9H1Z8 148 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 IFT122Q9HBG6 1241 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 PAK6Q9NQU5 681 aaPredicted RBP10.21□□□□□ -0.77
SDCBP-212ENST00000523483 PIN4Q9Y237 131 aaKnown RBP10.21□□□□□ -0.77
SDCBP-212ENST00000523483 PPME1Q9Y570 386 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.21□□□□□ -0.77
SDCBP-212ENST00000523483 ASAP2O43150 1006 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 SPAG1Q07617 926 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 ZCWPW2Q504Y3 356 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 LMBRD2Q68DH5 695 aaPredicted RBP10.21□□□□□ -0.77
SDCBP-212ENST00000523483 CCSAPQ6IQ19 270 aaPredicted RBP10.21□□□□□ -0.77
SDCBP-212ENST00000523483 TAF2Q6P1X5 1199 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 LRRC55Q6ZSA7 311 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 TMC6Q7Z403 805 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 IRF2BP1Q8IU81 584 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 CCDC155Q8N6L0 562 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 RNF169Q8NCN4 708 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 CDY2AQ9Y6F7 541 aa10.21□□□□□ -0.77
SDCBP-212ENST00000523483 SMIM35A0A1B0GVV1 85 aa10.21□□□□□ -0.78
SDCBP-212ENST00000523483 TEX33O43247 280 aa10.21□□□□□ -0.78
SDCBP-212ENST00000523483 CABYRO75952 493 aa10.21□□□□□ -0.78
SDCBP-212ENST00000523483 GHRP10912 638 aa10.21□□□□□ -0.78
SDCBP-212ENST00000523483 CST5P28325 142 aaPredicted RBP10.21□□□□□ -0.78
SDCBP-212ENST00000523483 ZNF75DP51815 510 aa10.21□□□□□ -0.78
SDCBP-212ENST00000523483 NCBP1Q09161 790 aaKnown RBP10.21□□□□□ -0.78
SDCBP-212ENST00000523483 BMT2Q1RMZ1 405 aa10.21□□□□□ -0.78
SDCBP-212ENST00000523483 CT47A1Q5JQC4 288 aaPredicted RBP10.21□□□□□ -0.78
SDCBP-212ENST00000523483 ATF7IP2Q5U623 682 aa10.21□□□□□ -0.78
SDCBP-212ENST00000523483 PPP4R3CPQ6ZMV5 832 aa10.21□□□□□ -0.78
SDCBP-212ENST00000523483 XXYLT1Q8NBI6 393 aa10.21□□□□□ -0.78
SDCBP-212ENST00000523483 GOLGA5Q8TBA6 731 aa10.21□□□□□ -0.78
SDCBP-212ENST00000523483 TMEM40Q8WWA1 233 aa10.21□□□□□ -0.78
SDCBP-212ENST00000523483 ZNF333Q96JL9 665 aa10.21□□□□□ -0.78
SDCBP-212ENST00000523483 THAP9Q9H5L6 903 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms