RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 MORC3Q14149 939 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 PPP2R5AQ15172 486 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 ZSCAN23Q3MJ62 389 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 ZNF697Q5TEC3 545 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 FAM178BQ8IXR5 827 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 DEFB123Q8N688 67 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 RNF149Q8NC42 400 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 NLRP7Q8WX94 980 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 SLC9A7Q96T83 725 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 NTPCRQ9BSD7 190 aaKnown RBP13.14□□□□□ -0.31
PVT1-215ENST00000522963 PBX4Q9BYU1 374 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 NKX2-4Q9H2Z4 354 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 SLC39A2Q9NP94 309 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 KMT5AQ9NQR1 393 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 OLFML3Q9NRN5 406 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 GDAQ9Y2T3 454 aa13.14□□□□□ -0.31
PVT1-215ENST00000522963 PTPRSQ13332 1948 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 A0A087WZ62 844 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 K7ENM7 598 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 EFCAB14O75071 495 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 RPS6KA5O75582 802 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 LETM1O95202 739 aaPredicted RBP13.13□□□□□ -0.31
PVT1-215ENST00000522963 AMHP03971 560 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 MYBP10242 640 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 MAPTP10636 758 aaKnown RBP13.13□□□□□ -0.31
PVT1-215ENST00000522963 CASP5P51878 434 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 PSMD2Q13200 908 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 TFDP1Q14186 410 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 RAB30Q15771 203 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 CDCA2Q69YH5 1023 aaPredicted RBP13.13□□□□□ -0.31
PVT1-215ENST00000522963 ZNF720Q7Z2F6 126 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 ZNF410Q86VK4 478 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 HERC6Q8IVU3 1022 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 SMYD4Q8IYR2 804 aaPredicted RBP13.13□□□□□ -0.31
PVT1-215ENST00000522963 TRIML1Q8N9V2 468 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 KIAA0895Q8NCT3 520 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 TMEM161BQ8NDZ6 487 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 DEPTORQ8TB45 409 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 TMEM40Q8WWA1 233 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 APBB2Q92870 758 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 TIFAQ96CG3 184 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 FDXACB1Q9BRP7 624 aaPredicted RBP13.13□□□□□ -0.31
PVT1-215ENST00000522963 GZF1Q9H116 711 aaPredicted RBP13.13□□□□□ -0.31
PVT1-215ENST00000522963 MRPL44Q9H9J2 332 aaKnown RBP13.13□□□□□ -0.31
PVT1-215ENST00000522963 IFT122Q9HBG6 1241 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 ARHGAP28Q9P2N2 729 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 PADI3Q9ULW8 664 aa13.13□□□□□ -0.31
PVT1-215ENST00000522963 NOC2LQ9Y3T9 749 aaKnown RBP13.13□□□□□ -0.31
PVT1-215ENST00000522963 SYCE3A1L190 88 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 TLL1O43897 1013 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 CSDE1O75534 798 aaKnown RBP13.12□□□□□ -0.31
PVT1-215ENST00000522963 PPP1R37O75864 691 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 GCNT3O95395 438 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 FGFR4P22455 802 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 CRYBB1P53674 252 aaPredicted RBP13.12□□□□□ -0.31
PVT1-215ENST00000522963 SMTNP53814 917 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 PTENP60484 403 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 CDC42EP1Q00587 391 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 POU5F1BQ06416 359 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 ZC2HC1CQ53FD0 456 aaPredicted RBP13.12□□□□□ -0.31
PVT1-215ENST00000522963 ZNF658Q5TYW1 1059 aaPredicted RBP13.12□□□□□ -0.31
PVT1-215ENST00000522963 EPM2AIP1Q7L775 607 aaPredicted RBP13.12□□□□□ -0.31
PVT1-215ENST00000522963 TAS1R3Q7RTX0 852 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 HAUS6Q7Z4H7 955 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 IFNLR1Q8IU57 520 aaPredicted RBP13.12□□□□□ -0.31
PVT1-215ENST00000522963 PHOSPHO2Q8TCD6 241 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 STRA6Q9BX79 667 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 NFKBIZQ9BYH8 718 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 ST6GALNAC4Q9H4F1 302 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 MINDY3Q9H8M7 445 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 KCNG1Q9UIX4 513 aa13.12□□□□□ -0.31
PVT1-215ENST00000522963 YBX2Q9Y2T7 364 aaKnown RBP13.12□□□□□ -0.31
PVT1-215ENST00000522963 RANBP2P49792 3224 aaKnown RBP13.12□□□□□ -0.31
PVT1-215ENST00000522963 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.11□□□□□ -0.31
PVT1-215ENST00000522963 DENND3A2RUS2 1198 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 PRPF6O94906 941 aaKnown RBP13.11□□□□□ -0.31
PVT1-215ENST00000522963 PHKA2P46019 1235 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 NLRP12P59046 1061 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 GTF2BQ00403 316 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 SASS6Q6UVJ0 657 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 ZBTB8OSQ8IWT0 167 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 ZNF710Q8N1W2 664 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 USP38Q8NB14 1042 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 SLC17A8Q8NDX2 589 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 KCNN1Q92952 543 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 FUCA2Q9BTY2 467 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 GCOM2Q9BZD3 368 aaPredicted RBP13.11□□□□□ -0.31
PVT1-215ENST00000522963 CCDC113Q9H0I3 377 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 C2orf40Q9H1Z8 148 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 SLC28A3Q9HAS3 691 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 ST3GAL5Q9UNP4 418 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 PCDHA11Q9Y5I1 949 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 SQORQ9Y6N5 450 aa13.11□□□□□ -0.31
PVT1-215ENST00000522963 H0YCG3 227 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 ENPP3O14638 875 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 GPR182O15218 404 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 CA3P07451 260 aa13.1□□□□□ -0.31
PVT1-215ENST00000522963 DARSP14868 501 aaKnown RBP13.1□□□□□ -0.31
PVT1-215ENST00000522963 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
PVT1-215ENST00000522963 EIF4BP23588 611 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms