RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 NAT10Q9H0A0 1025 aaKnown RBP28.18■■■□□ 2.1
NKX2-1-204ENST00000522719 HIPK3Q9H422 1215 aa28.18■■■□□ 2.1
NKX2-1-204ENST00000522719 TMEM39AQ9NV64 488 aa28.18■■■□□ 2.1
NKX2-1-204ENST00000522719 ANO6Q4KMQ2 910 aa28.18■■■□□ 2.1
NKX2-1-204ENST00000522719 TRAF7Q6Q0C0 670 aa28.18■■■□□ 2.1
NKX2-1-204ENST00000522719 LRRC8DQ7L1W4 858 aa28.18■■■□□ 2.1
NKX2-1-204ENST00000522719 NELFCDQ8IXH7 590 aa28.18■■■□□ 2.1
NKX2-1-204ENST00000522719 SYCP3Q8IZU3 236 aa28.18■■■□□ 2.1
NKX2-1-204ENST00000522719 TMEM40Q8WWA1 233 aa28.18■■■□□ 2.1
NKX2-1-204ENST00000522719 PARNO95453 639 aaKnown RBP28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 PIGRP01833 764 aa28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 IQCF3P0C7M6 154 aa28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 CCNE1P24864 410 aa28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 SNRPFP62306 86 aaKnown RBP28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 PAK1Q13153 545 aa28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 FBXO47Q5MNV8 452 aa28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 CENPPQ6IPU0 288 aa28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 KLHL10Q6JEL2 608 aa28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 MRPL4Q9BYD3 311 aaKnown RBP28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 GBP3Q9H0R5 595 aa28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 DNAJC25Q9H1X3 360 aa28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 KCTD10Q9H3F6 313 aa28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 CGNQ9P2M7 1197 aaKnown RBP28.17■■■□□ 2.1
NKX2-1-204ENST00000522719 BICDL2A1A5D9 508 aa28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 PDXKO00764 312 aa28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 CSDE1O75534 798 aaKnown RBP28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 ERLIN2O94905 339 aa28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 NCBP1Q09161 790 aaKnown RBP28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 PRPF4BQ13523 1007 aaKnown RBP28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 FOXR2Q6PJQ5 311 aa28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 ZPBP2Q6X784 338 aa28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 C11orf57Q6ZUT1 292 aaPredicted RBP28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 GOLGA5Q8TBA6 731 aa28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 NELFBQ8WX92 580 aa28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 P2RX5Q93086 422 aa28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 HTATIP2Q9BUP3 242 aa28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 TSPY26PQ9H489 355 aa28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 TYW1Q9NV66 732 aaKnown RBP28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 RWDD2AQ9UIY3 292 aa28.16■■■□□ 2.1
NKX2-1-204ENST00000522719 ZMYM2Q9UBW7 1377 aa28.15■■■□□ 2.1
NKX2-1-204ENST00000522719 RPS6KA5O75582 802 aa28.15■■■□□ 2.1
NKX2-1-204ENST00000522719 CAPN15O75808 1086 aa28.15■■■□□ 2.1
NKX2-1-204ENST00000522719 AMHR2Q16671 573 aa28.15■■■□□ 2.1
NKX2-1-204ENST00000522719 HS2ST1Q7LGA3 356 aa28.15■■■□□ 2.1
NKX2-1-204ENST00000522719 CATSPER4Q7RTX7 472 aa28.15■■■□□ 2.1
NKX2-1-204ENST00000522719 BICD1Q96G01 975 aa28.15■■■□□ 2.1
NKX2-1-204ENST00000522719 CTNND2Q9UQB3 1225 aa28.15■■■□□ 2.1
NKX2-1-204ENST00000522719 NOC2LQ9Y3T9 749 aaKnown RBP28.15■■■□□ 2.1
NKX2-1-204ENST00000522719 CNTNAP2Q9UHC6 1331 aa28.15■■■□□ 2.1
NKX2-1-204ENST00000522719 HNRNPDLO14979 420 aaKnown RBP28.14■■■□□ 2.1
NKX2-1-204ENST00000522719 KIAA0355O15063 1070 aa28.14■■■□□ 2.1
NKX2-1-204ENST00000522719 AXLP30530 894 aa28.14■■■□□ 2.1
NKX2-1-204ENST00000522719 LRRC63Q05C16 580 aa28.14■■■□□ 2.1
NKX2-1-204ENST00000522719 TSHZ1Q6ZSZ6 1077 aa28.14■■■□□ 2.1
NKX2-1-204ENST00000522719 BPIFA3Q9BQP9 254 aa28.14■■■□□ 2.1
NKX2-1-204ENST00000522719 SEMA6BQ9H3T3 888 aa28.14■■■□□ 2.1
NKX2-1-204ENST00000522719 TRAF3IP3Q9Y228 551 aa28.14■■■□□ 2.1
NKX2-1-204ENST00000522719 GPR182O15218 404 aa28.13■■■□□ 2.09
NKX2-1-204ENST00000522719 TGFB1I1O43294 461 aa28.13■■■□□ 2.09
NKX2-1-204ENST00000522719 CALUO43852 315 aaPredicted RBP28.13■■■□□ 2.09
NKX2-1-204ENST00000522719 TSPAN1O60635 241 aa28.13■■■□□ 2.09
NKX2-1-204ENST00000522719 LIG4P49917 911 aa28.13■■■□□ 2.09
NKX2-1-204ENST00000522719 LPIN1Q14693 890 aa28.13■■■□□ 2.09
NKX2-1-204ENST00000522719 FAM43BQ6ZT52 329 aaPredicted RBP28.13■■■□□ 2.09
NKX2-1-204ENST00000522719 FAM228AQ86W67 206 aa28.13■■■□□ 2.09
NKX2-1-204ENST00000522719 ACO2Q99798 780 aaKnown RBP28.13■■■□□ 2.09
NKX2-1-204ENST00000522719 TSG101Q99816 390 aa28.13■■■□□ 2.09
NKX2-1-204ENST00000522719 EDRF1Q3B7T1 1238 aa28.12■■■□□ 2.09
NKX2-1-204ENST00000522719 ZCWPW2Q504Y3 356 aa28.12■■■□□ 2.09
NKX2-1-204ENST00000522719 TARS2Q9BW92 718 aaKnown RBP28.12■■■□□ 2.09
NKX2-1-204ENST00000522719 EDN1P05305 212 aa28.11■■■□□ 2.09
NKX2-1-204ENST00000522719 GHRP10912 638 aa28.11■■■□□ 2.09
NKX2-1-204ENST00000522719 FGFR4P22455 802 aa28.11■■■□□ 2.09
NKX2-1-204ENST00000522719 ZNF165P49910 485 aa28.11■■■□□ 2.09
NKX2-1-204ENST00000522719 MBTPS1Q14703 1052 aa28.11■■■□□ 2.09
NKX2-1-204ENST00000522719 ATF7IP2Q5U623 682 aa28.11■■■□□ 2.09
NKX2-1-204ENST00000522719 SLFN12LQ6IEE8 588 aa28.11■■■□□ 2.09
NKX2-1-204ENST00000522719 TMEM174Q8WUU8 243 aa28.11■■■□□ 2.09
NKX2-1-204ENST00000522719 PPP1R12CQ9BZL4 782 aa28.11■■■□□ 2.09
NKX2-1-204ENST00000522719 AGPAT5Q9NUQ2 364 aa28.11■■■□□ 2.09
NKX2-1-204ENST00000522719 TNFSF13BQ9Y275 285 aa28.11■■■□□ 2.09
NKX2-1-204ENST00000522719 UMODL1Q5DID0 1318 aa28.11■■■□□ 2.09
NKX2-1-204ENST00000522719 SCN5AQ14524 2016 aa28.11■■■□□ 2.09
NKX2-1-204ENST00000522719 B4GALT5O43286 388 aa28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 TOM1L1O75674 476 aa28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 TIMP1P01033 207 aa28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 ARF4P18085 180 aaPredicted RBP28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 PAK2Q13177 524 aa28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 NFIL3Q16649 462 aa28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 ANKRD40Q6AI12 368 aa28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 TTI2Q6NXR4 508 aa28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 C12orf56Q8IXR9 622 aa28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 WNT8AQ9H1J5 351 aa28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 AGO3Q9H9G7 860 aaKnown RBP28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 ERVK-5Q9HDB9 667 aa28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 PRDM5Q9NQX1 630 aaPredicted RBP28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 AGPAT3Q9NRZ7 376 aa28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 PADI3Q9ULW8 664 aa28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 ST3GAL5Q9UNP4 418 aa28.1■■■□□ 2.09
NKX2-1-204ENST00000522719 STYXL1Q9Y6J8 313 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms