RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 TMEM143Q96AN5 459 aa17.12■□□□□ 0.33
TRAPPC9-213ENST00000522504 DDX25Q9UHL0 483 aaKnown RBP17.12■□□□□ 0.33
TRAPPC9-213ENST00000522504 COL4A3BPQ9Y5P4 624 aa17.12■□□□□ 0.33
TRAPPC9-213ENST00000522504 FAM186AA6NE01 2351 aa17.12■□□□□ 0.33
TRAPPC9-213ENST00000522504 PRR23AA6NEV1 266 aa17.11■□□□□ 0.33
TRAPPC9-213ENST00000522504 DTNBO60941 627 aa17.11■□□□□ 0.33
TRAPPC9-213ENST00000522504 N4BP1O75113 896 aaKnown RBP17.11■□□□□ 0.33
TRAPPC9-213ENST00000522504 SRGAP2CP0DJJ0 459 aa17.11■□□□□ 0.33
TRAPPC9-213ENST00000522504 SSRP1Q08945 709 aaKnown RBP17.11■□□□□ 0.33
TRAPPC9-213ENST00000522504 MOXD1Q6UVY6 613 aa17.11■□□□□ 0.33
TRAPPC9-213ENST00000522504 FRMD5Q7Z6J6 570 aa17.11■□□□□ 0.33
TRAPPC9-213ENST00000522504 DAGLBQ8NCG7 672 aa17.11■□□□□ 0.33
TRAPPC9-213ENST00000522504 SFXN1Q9H9B4 322 aa17.11■□□□□ 0.33
TRAPPC9-213ENST00000522504 BMP2KQ9NSY1 1161 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC9-213ENST00000522504 NRP1O14786 923 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 ZBTB39O15060 712 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 POMCP01189 267 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 KLRC2P26717 231 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 CLCN5P51795 746 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 PPP2R5CQ13362 524 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 PPFIBP1Q86W92 1011 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 TRIM22Q8IYM9 498 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 SMG8Q8ND04 991 aaKnown RBP17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 PGBD4Q96DM1 585 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 C22orf23Q9BZE7 217 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 MFSD1Q9H3U5 465 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 DHX33Q9H6R0 707 aaKnown RBP17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 RSAD1Q9HA92 442 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 KCNMB3Q9NPA1 279 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 MARCH5Q9NX47 278 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 KCNJ14Q9UNX9 436 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 DENND4AQ7Z401 1863 aa17.1■□□□□ 0.33
TRAPPC9-213ENST00000522504 F8W810 466 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 C2CD2LO14523 706 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 DEXIO95424 95 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 EFEMP2O95967 443 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 MYBP10242 640 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 PSMA5P28066 241 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 QARSP47897 775 aaKnown RBP17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 LAMTOR4Q0VGL1 99 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 NONOQ15233 471 aaKnown RBP eCLIP17.09■□□□□ 0.336e-6■■■■□ 21
TRAPPC9-213ENST00000522504 LETM2Q2VYF4 491 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 CCDC149Q6ZUS6 474 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 RUFY3Q7L099 469 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 OTOP3Q7RTS5 596 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 FLCNQ8NFG4 579 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 URGCPQ8TCY9 931 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 HAS1Q92839 578 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 CEP170P1Q96L14 293 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 EMILIN2Q9BXX0 1053 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 RNF39Q9H2S5 420 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 KCNK12Q9HB15 430 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 ZSWIM6Q9HCJ5 1215 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 FAN1Q9Y2M0 1017 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 PRG3Q9Y2Y8 225 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 DNAH14Q0VDD8 3507 aa17.09■□□□□ 0.33
TRAPPC9-213ENST00000522504 CARNS1A5YM72 827 aa17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 NARSO43776 548 aaKnown RBP17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 ALDH2P05091 517 aa17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 STK3Q13188 491 aa17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 TDGQ13569 410 aa17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 SRGAP1Q7Z6B7 1085 aa17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 RSAD2Q8WXG1 361 aa17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 SLC7A3Q8WY07 619 aa17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 ACSF2Q96CM8 615 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 JPH2Q9BR39 696 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 TMEM175Q9BSA9 504 aa17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 EIF2AQ9BY44 585 aaKnown RBP17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 MRPL17Q9NRX2 175 aaKnown RBP17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 GJB4Q9NTQ9 266 aa17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 RGL1Q9NZL6 768 aa17.08■□□□□ 0.32
TRAPPC9-213ENST00000522504 TEX28O15482 410 aa17.07■□□□□ 0.32
TRAPPC9-213ENST00000522504 SOD2P04179 222 aa17.07■□□□□ 0.32
TRAPPC9-213ENST00000522504 NCLP19338 710 aaKnown RBP17.07■□□□□ 0.32
TRAPPC9-213ENST00000522504 AOC1P19801 751 aa17.07■□□□□ 0.32
TRAPPC9-213ENST00000522504 KRT25Q7Z3Z0 450 aa17.07■□□□□ 0.32
TRAPPC9-213ENST00000522504 COLGALT2Q8IYK4 626 aa17.07■□□□□ 0.32
TRAPPC9-213ENST00000522504 PSPC1Q8WXF1 523 aaKnown RBP17.07■□□□□ 0.32
TRAPPC9-213ENST00000522504 ZNF274Q96GC6 653 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC9-213ENST00000522504 RPS6KC1Q96S38 1066 aa17.07■□□□□ 0.32
TRAPPC9-213ENST00000522504 SLKQ9H2G2 1235 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC9-213ENST00000522504 MAN1C1Q9NR34 630 aa17.07■□□□□ 0.32
TRAPPC9-213ENST00000522504 MIOSQ9NXC5 875 aa17.07■□□□□ 0.32
TRAPPC9-213ENST00000522504 DUSP12Q9UNI6 340 aa17.07■□□□□ 0.32
TRAPPC9-213ENST00000522504 CNTNAP2Q9UHC6 1331 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 SPDYE4A6NLX3 237 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 RFPL2O75678 378 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 P4HBP07237 508 aaKnown RBP17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 YWHABP31946 246 aaKnown RBP17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 AK2P54819 239 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 EMC2Q15006 297 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 EARS2Q5JPH6 523 aaKnown RBP17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 KIAA0319Q5VV43 1072 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 GALNT17Q6IS24 598 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 POTEGQ6S5H5 508 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 C15orf39Q6ZRI6 1047 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 FERMT3Q86UX7 667 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 RNF168Q8IYW5 571 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 SIX5Q8N196 739 aa17.06■□□□□ 0.32
TRAPPC9-213ENST00000522504 RNF149Q8NC42 400 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms