RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 PRR16Q569H4 304 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 SPOUT1Q5T280 376 aaKnown RBP12.54□□□□□ -0.4
CSMD1-210ENST00000521646 KCNT2Q6UVM3 1135 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 FBXL6Q8N531 539 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 METTL13Q8N6R0 699 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 C12orf76Q8N812 135 aaPredicted RBP12.54□□□□□ -0.4
CSMD1-210ENST00000521646 ZNF577Q9BSK1 485 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 TMEM117Q9H0C3 514 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 C1orf112Q9NSG2 853 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 RBM28Q9NW13 759 aaKnown RBP12.54□□□□□ -0.4
CSMD1-210ENST00000521646 GMPR2Q9P2T1 348 aaKnown RBP12.54□□□□□ -0.4
CSMD1-210ENST00000521646 PCDHB12Q9Y5F1 795 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 HCFC2Q9Y5Z7 792 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 DENND4AQ7Z401 1863 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 NID2Q14112 1375 aa12.54□□□□□ -0.4
CSMD1-210ENST00000521646 C2CD4DB7Z1M9 353 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 GPR182O15218 404 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 CLASP2O75122 1294 aaKnown RBP12.53□□□□□ -0.4
CSMD1-210ENST00000521646 AP1G2O75843 785 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 RPLP2P05387 115 aaKnown RBP12.53□□□□□ -0.4
CSMD1-210ENST00000521646 CIITAP33076 1130 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 GPC3P51654 580 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 TARBP2Q15633 366 aaKnown RBP12.53□□□□□ -0.4
CSMD1-210ENST00000521646 NPY5RQ15761 445 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 LONRF3Q496Y0 759 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 FAM160B1Q5W0V3 765 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 ZNF746Q6NUN9 644 aaPredicted RBP12.53□□□□□ -0.4
CSMD1-210ENST00000521646 EFCAB12Q6NXP0 572 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 MIS18BP1Q6P0N0 1132 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 BPHLQ86WA6 291 aaPredicted RBP12.53□□□□□ -0.4
CSMD1-210ENST00000521646 SLC39A11Q8N1S5 342 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 HELQQ8TDG4 1101 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 KCNB2Q92953 911 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 LPPQ93052 612 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 UNC45AQ9H3U1 944 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 ELAC1Q9H777 363 aaKnown RBP12.53□□□□□ -0.4
CSMD1-210ENST00000521646 ATP6V0A4Q9HBG4 840 aa12.53□□□□□ -0.4
CSMD1-210ENST00000521646 ESYT2A0FGR8 921 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 ASGR2P07307 311 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 DARSP14868 501 aaKnown RBP12.52□□□□□ -0.41
CSMD1-210ENST00000521646 LAG3P18627 525 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 AVPR2P30518 371 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 ZNF76P36508 570 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 PRKCEQ02156 737 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 B3GNT9Q6UX72 402 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 CKAP2LQ8IYA6 745 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 TMEM105Q8N8V8 129 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 RNF169Q8NCN4 708 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 LRRN4Q8WUT4 740 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 ZNF775Q96BV0 537 aaPredicted RBP12.52□□□□□ -0.41
CSMD1-210ENST00000521646 NCOA5Q9HCD5 579 aaKnown RBP12.52□□□□□ -0.41
CSMD1-210ENST00000521646 LZTS1Q9Y250 596 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 PCDHA10Q9Y5I2 948 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 C2orf16Q68DN1 1984 aa12.52□□□□□ -0.41
CSMD1-210ENST00000521646 EPCAMP16422 314 aa12.51□□□□□ -0.41
CSMD1-210ENST00000521646 EIF4BP23588 611 aaKnown RBP12.51□□□□□ -0.41
CSMD1-210ENST00000521646 METAP2P50579 478 aaKnown RBP eCLIP12.51□□□□□ -0.41
CSMD1-210ENST00000521646 BMP2KLQ5H9B9 411 aa12.51□□□□□ -0.41
CSMD1-210ENST00000521646 Q6ZUG5 572 aa12.51□□□□□ -0.41
CSMD1-210ENST00000521646 KSR1Q8IVT5 923 aa12.51□□□□□ -0.41
CSMD1-210ENST00000521646 MRPL43Q8N983 215 aaKnown RBP12.51□□□□□ -0.41
CSMD1-210ENST00000521646 BRF1Q92994 677 aa12.51□□□□□ -0.41
CSMD1-210ENST00000521646 PPP2R3CQ969Q6 453 aa12.51□□□□□ -0.41
CSMD1-210ENST00000521646 PCMTD1Q96MG8 357 aaPredicted RBP12.51□□□□□ -0.41
CSMD1-210ENST00000521646 CDCA3Q99618 268 aaPredicted RBP12.51□□□□□ -0.41
CSMD1-210ENST00000521646 ATP13A2Q9NQ11 1180 aa12.51□□□□□ -0.41
CSMD1-210ENST00000521646 ENTPD7Q9NQZ7 604 aa12.51□□□□□ -0.41
CSMD1-210ENST00000521646 VPS54Q9P1Q0 977 aa12.51□□□□□ -0.41
CSMD1-210ENST00000521646 AKT3Q9Y243 479 aa12.51□□□□□ -0.41
CSMD1-210ENST00000521646 RIF1Q5UIP0 2472 aaKnown RBP12.51□□□□□ -0.41
CSMD1-210ENST00000521646 A0A0U1RQF3 1178 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 H0Y858 1186 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 hCG_1984214I3L0E3 225 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 M0R2N6 131 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 CHMP2AO43633 222 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 TDP2O95551 362 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 BCAR1P56945 870 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 REXO1Q8N1G1 1221 aaKnown RBP12.5□□□□□ -0.41
CSMD1-210ENST00000521646 LRRC43Q8N309 656 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 ZNF713Q8N859 430 aaPredicted RBP12.5□□□□□ -0.41
CSMD1-210ENST00000521646 KREMEN2Q8NCW0 462 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 SLC5A5Q92911 643 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 ZNF558Q96NG5 402 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 AIFM3Q96NN9 605 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 AGXT2Q9BYV1 514 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 ZBP1Q9H171 429 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 DISC1Q9NRI5 854 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 WRAP73Q9P2S5 460 aaPredicted RBP12.5□□□□□ -0.41
CSMD1-210ENST00000521646 DNAJB4Q9UDY4 337 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 SNX14Q9Y5W7 946 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 GVINP1Q7Z2Y8 2422 aa12.5□□□□□ -0.41
CSMD1-210ENST00000521646 ZNF292O60281 2723 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 IGKV6-21A0A0C4DH24 114 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 CAPN5O15484 640 aaPredicted RBP12.49□□□□□ -0.41
CSMD1-210ENST00000521646 PRPF3O43395 683 aaKnown RBP12.49□□□□□ -0.41
CSMD1-210ENST00000521646 PSMD10O75832 226 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 PSAPP07602 524 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 SYNE3Q6ZMZ3 975 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 ASCL5Q7RTU5 278 aa12.49□□□□□ -0.41
CSMD1-210ENST00000521646 TMC7Q7Z402 723 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms