RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 PLCB3Q01970 1234 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 GRIN1Q05586 938 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 E2F4Q16254 413 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 ZPBP2Q6X784 338 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 SYMPKQ92797 1274 aaKnown RBP10.45□□□□□ -0.74
CLK4-209ENST00000521621 SH2D3AQ9BRG2 576 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 C11orf84Q9BUA3 381 aaPredicted RBP10.45□□□□□ -0.74
CLK4-209ENST00000521621 TNMDQ9H2S6 317 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 CWH43Q9H720 699 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 PTPRHQ9HD43 1115 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 DNAH12Q6ZR08 3092 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 ATG2AQ2TAZ0 1938 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 ARHGEF15O94989 841 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 GAP43P17677 238 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 DMP1Q13316 513 aaPredicted RBP10.44□□□□□ -0.74
CLK4-209ENST00000521621 ALCAMQ13740 583 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 MAPK6Q16659 721 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 KYAT1Q16773 422 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 EPC2Q52LR7 807 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 RESP18Q5W5W9 173 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 LARSQ9P2J5 1176 aaKnown RBP10.44□□□□□ -0.74
CLK4-209ENST00000521621 PIN4Q9Y237 131 aaKnown RBP10.44□□□□□ -0.74
CLK4-209ENST00000521621 PCDHB2Q9Y5E7 798 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 PPM1AP35813 382 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 NPTX2P47972 431 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 SMTNP53814 917 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 GIT2Q14161 759 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 BTG3Q14201 252 aaPredicted RBP10.44□□□□□ -0.74
CLK4-209ENST00000521621 PTPROQ16827 1216 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 SMG8Q8ND04 991 aaKnown RBP10.44□□□□□ -0.74
CLK4-209ENST00000521621 FBXO22Q8NEZ5 403 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 DEPTORQ8TB45 409 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 LRRC15Q8TF66 581 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 STRA6Q9BX79 667 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 SCAND2PQ9GZW5 306 aaPredicted RBP10.44□□□□□ -0.74
CLK4-209ENST00000521621 MRPL42Q9Y6G3 142 aaKnown RBP10.44□□□□□ -0.74
CLK4-209ENST00000521621 MYH11P35749 1972 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 CEP290O15078 2479 aa10.44□□□□□ -0.74
CLK4-209ENST00000521621 NCK2O43639 380 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 OFD1O75665 1012 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 EFEMP2O95967 443 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 MYL1P05976 194 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 ARF4P18085 180 aaPredicted RBP10.43□□□□□ -0.74
CLK4-209ENST00000521621 XKR4Q5GH76 650 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 CLLU1OSQ5K130 101 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 RRAGBQ5VZM2 374 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 MRPL38Q96DV4 380 aaKnown RBP10.43□□□□□ -0.74
CLK4-209ENST00000521621 GPRC5CQ9NQ84 441 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 OLFML3Q9NRN5 406 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 KBTBD4Q9NVX7 518 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 MTCH2Q9Y6C9 303 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 A0A1W2PQ27 194 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 A0A1W2PQ64 194 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 A0A1W2PQD8 194 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 FSCN2O14926 492 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 CDC25AP30304 524 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 KRT85P78386 507 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 ADALQ6DHV7 355 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 Q7L0L9 218 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 TRMT1LQ7Z2T5 733 aaKnown RBP10.43□□□□□ -0.74
CLK4-209ENST00000521621 TMEM161BQ8NDZ6 487 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 EPSTI1Q96J88 318 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 PDZD7Q9H5P4 517 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 FOXD4L1Q9NU39 408 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 GINS2Q9Y248 185 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 PDCD11Q14690 1871 aaKnown RBP10.43□□□□□ -0.74
CLK4-209ENST00000521621 PRKCBP05771 671 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 ADRB2P07550 413 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 MCF2P10911 925 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 CMA1P23946 247 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 GTF2BQ00403 316 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 PRPF4BQ13523 1007 aaKnown RBP10.43□□□□□ -0.74
CLK4-209ENST00000521621 KARSQ15046 597 aaKnown RBP10.43□□□□□ -0.74
CLK4-209ENST00000521621 TIGD5Q53EQ6 642 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 TWF2Q6IBS0 349 aaKnown RBP10.43□□□□□ -0.74
CLK4-209ENST00000521621 FAM173BQ6P4H8 233 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 SV2BQ7L1I2 683 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 COLGALT1Q8NBJ5 622 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 TMEM174Q8WUU8 243 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 FIZ1Q96SL8 496 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 MRPL4Q9BYD3 311 aaKnown RBP10.43□□□□□ -0.74
CLK4-209ENST00000521621 PARVGQ9HBI0 331 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 STYXL1Q9Y6J8 313 aa10.43□□□□□ -0.74
CLK4-209ENST00000521621 LRRIQ4A6NIV6 560 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 INO80B-WBP1J3KQ70 363 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 ABLIM1O14639 778 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 FOSL2P15408 326 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 MARCKSP29966 332 aaPredicted RBP10.42□□□□□ -0.74
CLK4-209ENST00000521621 NT5DC1Q5TFE4 455 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 SHC4Q6S5L8 630 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 GLB1LQ6UWU2 654 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 AGMOQ6ZNB7 445 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 TAS1R3Q7RTX0 852 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 GPBP1Q86WP2 473 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 DNAJC19Q96DA6 116 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 ACO2Q99798 780 aaKnown RBP10.42□□□□□ -0.74
CLK4-209ENST00000521621 REEP2Q9BRK0 252 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 KMT5AQ9NQR1 393 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 HPSEQ9Y251 543 aa10.42□□□□□ -0.74
CLK4-209ENST00000521621 IPPQ9Y573 584 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms