RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 HNRNPLP14866 589 aaKnown RBP eCLIP8.57□□□□□ -1.04
NUDCD1-204ENST00000521439 MCAMP43121 646 aa8.57□□□□□ -1.04
NUDCD1-204ENST00000521439 MEOX1P50221 254 aa8.57□□□□□ -1.04
NUDCD1-204ENST00000521439 FAM26FQ5R3K3 315 aa8.57□□□□□ -1.04
NUDCD1-204ENST00000521439 LARP4Q71RC2 724 aaKnown RBP eCLIP8.57□□□□□ -1.04
NUDCD1-204ENST00000521439 KLHL36Q8N4N3 616 aa8.57□□□□□ -1.04
NUDCD1-204ENST00000521439 TXNDC5Q8NBS9 432 aaKnown RBP8.57□□□□□ -1.04
NUDCD1-204ENST00000521439 ADAMTS17Q8TE56 1095 aa8.57□□□□□ -1.04
NUDCD1-204ENST00000521439 CLIP3Q96DZ5 547 aa8.57□□□□□ -1.04
NUDCD1-204ENST00000521439 ADI1Q9BV57 179 aa8.57□□□□□ -1.04
NUDCD1-204ENST00000521439 BARX1Q9HBU1 254 aaPredicted RBP8.57□□□□□ -1.04
NUDCD1-204ENST00000521439 SERPINB13Q9UIV8 391 aa8.57□□□□□ -1.04
NUDCD1-204ENST00000521439 A0A1W2PR48 441 aa8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 C9orf118A6NHY6 69 aa8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 GAAP10253 952 aa8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 LPOP22079 712 aaPredicted RBP8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 MEF2AQ02078 507 aaPredicted RBP8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 PCOLCEQ15113 449 aa8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 GFOD2Q3B7J2 385 aa8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 UAP1L1Q3KQV9 507 aa8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 MINDY4Q4G0A6 757 aa8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 EPM2AIP1Q7L775 607 aaPredicted RBP8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 UNC5BQ8IZJ1 945 aa8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 NRG4Q8WWG1 115 aa8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 SAP30BPQ9UHR5 308 aaKnown RBP8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 ADAM29Q9UKF5 820 aa8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 DNM3Q9UQ16 869 aa8.56□□□□□ -1.04
NUDCD1-204ENST00000521439 KRTAP4-8A0A0G2JLE6 195 aa8.55□□□□□ -1.04
NUDCD1-204ENST00000521439 TMEM127O75204 238 aa8.55□□□□□ -1.04
NUDCD1-204ENST00000521439 POU2F2P09086 479 aa8.55□□□□□ -1.04
NUDCD1-204ENST00000521439 GSPT1P15170 499 aaKnown RBP8.55□□□□□ -1.04
NUDCD1-204ENST00000521439 CSF2RBP32927 897 aa8.55□□□□□ -1.04
NUDCD1-204ENST00000521439 WASP42768 502 aa8.55□□□□□ -1.04
NUDCD1-204ENST00000521439 USP10Q14694 798 aaKnown RBP8.55□□□□□ -1.04
NUDCD1-204ENST00000521439 ZNF827Q17R98 1081 aa8.55□□□□□ -1.04
NUDCD1-204ENST00000521439 FAM180AQ6UWF9 173 aa8.55□□□□□ -1.04
NUDCD1-204ENST00000521439 LRGUKQ96M69 825 aa8.55□□□□□ -1.04
NUDCD1-204ENST00000521439 CHMP4AQ9BY43 222 aa8.55□□□□□ -1.04
NUDCD1-204ENST00000521439 DMRT3Q9NQL9 472 aa8.55□□□□□ -1.04
NUDCD1-204ENST00000521439 RBM12Q9NTZ6 932 aaKnown RBP8.55□□□□□ -1.04
NUDCD1-204ENST00000521439 LTA4HP09960 611 aaKnown RBP8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 ZNF888P0CJ79 500 aaPredicted RBP8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 HSPA6P17066 643 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 HOXA5P20719 270 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 CTSSP25774 331 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 KCNC1P48547 511 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 MRE11P49959 708 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 SLURP1P55000 103 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 PPP3CAQ08209 521 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 ADAM15Q13444 863 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 IFIT1BQ5T764 474 aaKnown RBP8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 CLEC14AQ86T13 490 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 ZNF761Q86XN6 746 aaPredicted RBP8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 PIK3C3Q8NEB9 887 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 GPR156Q8NFN8 814 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 RIN2Q8WYP3 895 aaPredicted RBP8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 LPPQ93052 612 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 UIMC1Q96RL1 719 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 NMRK2Q9NPI5 230 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 ANLNQ9NQW6 1124 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 INTUQ9ULD6 942 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 ZDHHC9Q9Y397 364 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 RPTORQ8N122 1335 aa8.54□□□□□ -1.04
NUDCD1-204ENST00000521439 ADAMTS20P59510 1910 aa8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 HTRA2O43464 458 aaPredicted RBP8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 OFD1O75665 1012 aa8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 PDCP20941 246 aa8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 RRADP55042 308 aa8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 GJC2Q5T442 439 aaPredicted RBP8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 TAS1R1Q7RTX1 841 aa8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 LCORQ96JN0 433 aaPredicted RBP8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 GTPBP4Q9BZE4 634 aaKnown RBP8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 KIAA1683Q9H0B3 1180 aa8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 SLC12A5Q9H2X9 1139 aa8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 FAM184BQ9ULE4 1060 aa8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 LIMCH1Q9UPQ0 1083 aa8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 IPPQ9Y573 584 aa8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 CTDP1Q9Y5B0 961 aaPredicted RBP8.53□□□□□ -1.04
NUDCD1-204ENST00000521439 C2orf78A6NCI8 922 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 CCDC154A6NI56 674 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 PRC1O43663 620 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 AP1G1O43747 822 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 EDNRBP24530 442 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 TBX4P57082 545 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 MGAT2Q10469 447 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 NOMO1Q15155 1222 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 UBE3CQ15386 1083 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 C19orf54Q5BKX5 351 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 ZMAT1Q5H9K5 638 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 ATAT1Q5SQI0 421 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 AGBL4Q5VU57 503 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 LILRA6Q6PI73 481 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 ABHD15Q6UXT9 468 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 USP45Q70EL2 814 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 GPR155Q7Z3F1 870 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 CATIPQ7Z7H3 387 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 PRR18Q8N4B5 295 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 PLA2G15Q8NCC3 412 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 SLC35G2Q8TBE7 412 aa8.52□□□□□ -1.05
NUDCD1-204ENST00000521439 SNX33Q8WV41 574 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms