RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 ARHGEF26Q96DR7 871 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 ERP44Q9BS26 406 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 HEMGNQ9BXL5 484 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 ADAM7Q9H2U9 754 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 OCEL1Q9H607 264 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 ACP6Q9NPH0 428 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 TMOD3Q9NYL9 352 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 SEC63Q9UGP8 760 aaKnown RBP10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 BARX2Q9UMQ3 279 aaPredicted RBP10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 AFF2P51816 1311 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 CFAP69A5D8W1 941 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 PJA2O43164 708 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 HNRNPRO43390 633 aaKnown RBP10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 KRT15P19012 456 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 CASP4P49662 377 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 ZNF268Q14587 947 aaPredicted RBP10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 ASTE1Q2TB18 679 aaPredicted RBP10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 C2CD6Q53TS8 623 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 ARL6IP4Q66PJ3 421 aaKnown RBP10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 CENPPQ6IPU0 288 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 TTC1Q99614 292 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 KIAA1683Q9H0B3 1180 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 RASAL2Q9UJF2 1139 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 WDR37Q9Y2I8 494 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 ARL2BPQ9Y2Y0 163 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 A0A0G2JND7 137 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 SSU72P8A0A1W2PR75 194 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 OPHN1O60890 802 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 ATP9AO75110 1047 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 KRT36O76013 467 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 CALM1P0DP23 149 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 CALM2P0DP24 149 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 CALM3P0DP25 149 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 PRDX5P30044 214 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 BPIFB4P59827 614 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 USP46P62068 366 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 ALX1Q15699 326 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 NEK8Q86SG6 692 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 MAPKAPK5Q8IW41 473 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 VPS52Q8N1B4 723 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 MORC4Q8TE76 937 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 SREK1Q8WXA9 508 aaKnown RBP10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 CLMNQ96JQ2 1002 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 GCNT4Q9P109 453 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 SCOCQ9UIL1 159 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 SYNPO2Q9UMS6 1093 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 ZBTB1Q9Y2K1 713 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 POTEB3A0JP26 581 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 C2orf71A6NGG8 1288 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 POTECB2RU33 542 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 TRIM49P0CI25 452 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 TRIM49CP0CI26 452 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 TNFAIP3P21580 790 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 SSTR3P32745 418 aaPredicted RBP10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 CYP2J2P51589 502 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 AUHQ13825 339 aaKnown RBP10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 MPP2Q14168 576 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 DAB2IPQ5VWQ8 1189 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 POTEBQ6S5H4 581 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 NCCRP1Q6ZVX7 275 aaPredicted RBP10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 ECHDC2Q86YB7 292 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 SLC25A41Q8N5S1 370 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 PIGOQ8TEQ8 1089 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 VCXQ9H320 206 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 ZWILCHQ9H900 591 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 MKS1Q9NXB0 559 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 STK10O94804 968 aaKnown RBP10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 CSPG5O95196 566 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 UCHL3P15374 230 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 KLRK1P26718 216 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 CCNFP41002 786 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 EVA1CP58658 441 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 FXNQ16595 210 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 THOC7Q6I9Y2 204 aaKnown RBP10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 CCDC137Q6PK04 289 aaKnown RBP10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 LRRC55Q6ZSA7 311 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 PIGWQ7Z7B1 504 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 ZSCAN29Q8IWY8 852 aaPredicted RBP10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 ALG3Q92685 438 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 MCUR1Q96AQ8 359 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 ISCA1Q9BUE6 129 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 VCX3BQ9H321 246 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 VCX3AQ9NNX9 186 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 NPHS2Q9NP85 383 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 TTC7AQ9ULT0 858 aaPredicted RBP10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 ZNF510Q9Y2H8 683 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 TSC22D4Q9Y3Q8 395 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 KDM4FA0A1W2PPD8 638 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 SLC26A4O43511 780 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 CALCAP01258 141 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 GM2AP17900 193 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 SP100P23497 879 aaPredicted RBP10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 TRAPPC10P48553 1259 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 CDK17Q00537 523 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 ECM1Q16610 540 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 C6orf118Q5T5N4 469 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 UNC13DQ70J99 1090 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 FAM13CQ8NE31 585 aa10.8□□□□□ -0.68
PDGFRB-207ENST00000520579 ATP8B4Q8TF62 1192 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms