RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 SP4Q02446 784 aa27.89■■■□□ 2.06
COL13A1-213ENST00000520267 DMP1Q13316 513 aaPredicted RBP27.89■■■□□ 2.06
COL13A1-213ENST00000520267 OTUD6AQ7L8S5 288 aa27.89■■■□□ 2.06
COL13A1-213ENST00000520267 DAAM2Q86T65 1068 aa27.89■■■□□ 2.06
COL13A1-213ENST00000520267 MAP4K3Q8IVH8 894 aa27.89■■■□□ 2.06
COL13A1-213ENST00000520267 METTL13Q8N6R0 699 aa27.89■■■□□ 2.06
COL13A1-213ENST00000520267 SLC35G2Q8TBE7 412 aa27.89■■■□□ 2.06
COL13A1-213ENST00000520267 SLC20A1Q8WUM9 679 aa27.89■■■□□ 2.06
COL13A1-213ENST00000520267 TEX13BQ9BXU2 312 aa27.89■■■□□ 2.06
COL13A1-213ENST00000520267 KMT5AQ9NQR1 393 aa27.89■■■□□ 2.06
COL13A1-213ENST00000520267 SEPT11Q9NVA2 429 aaKnown RBP27.89■■■□□ 2.06
COL13A1-213ENST00000520267 TMEM59LQ9UK28 342 aa27.89■■■□□ 2.06
COL13A1-213ENST00000520267 SSC5DA1L4H1 1573 aa27.89■■■□□ 2.06
COL13A1-213ENST00000520267 DENND3A2RUS2 1198 aa27.89■■■□□ 2.05
COL13A1-213ENST00000520267 ATP2A1O14983 1001 aa27.89■■■□□ 2.05
COL13A1-213ENST00000520267 CEP104O60308 925 aa27.89■■■□□ 2.05
COL13A1-213ENST00000520267 SORBS3O60504 671 aa27.89■■■□□ 2.05
COL13A1-213ENST00000520267 NT5DC3Q86UY8 548 aa27.89■■■□□ 2.05
COL13A1-213ENST00000520267 EXOC4Q96A65 974 aa27.89■■■□□ 2.05
COL13A1-213ENST00000520267 AGPAT1Q99943 283 aa27.89■■■□□ 2.05
COL13A1-213ENST00000520267 ACAD9Q9H845 621 aa27.89■■■□□ 2.05
COL13A1-213ENST00000520267 LCTP09848 1927 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 ZSCAN5CA6NGD5 496 aaPredicted RBP27.88■■■□□ 2.05
COL13A1-213ENST00000520267 HEXIM1O94992 359 aaKnown RBP27.88■■■□□ 2.05
COL13A1-213ENST00000520267 CNGA1P29973 690 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 MXI1P50539 228 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 RIN2Q8WYP3 895 aaPredicted RBP27.88■■■□□ 2.05
COL13A1-213ENST00000520267 KAT5Q92993 513 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 ATP6V0A1Q93050 837 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 GDF3Q9NR23 364 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 TMOD4Q9NZQ9 345 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 SUCLA2Q9P2R7 463 aaPredicted RBP27.88■■■□□ 2.05
COL13A1-213ENST00000520267 PFASO15067 1338 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 AGPSO00116 658 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 EPHB4P54760 987 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 PRKG1Q13976 671 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 SNRNP35Q16560 246 aaKnown RBP27.88■■■□□ 2.05
COL13A1-213ENST00000520267 SYCE1Q8N0S2 351 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 RFFLQ8WZ73 363 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 ARHGEF26Q96DR7 871 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 SGIP1Q9BQI5 828 aa27.88■■■□□ 2.05
COL13A1-213ENST00000520267 JPH1Q9HDC5 661 aaPredicted RBP27.88■■■□□ 2.05
COL13A1-213ENST00000520267 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.88■■■□□ 2.05
COL13A1-213ENST00000520267 TULP1O00294 542 aaPredicted RBP27.87■■■□□ 2.05
COL13A1-213ENST00000520267 PSAPP07602 524 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 GGCXP38435 758 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 CCDC60Q8IWA6 550 aaPredicted RBP27.87■■■□□ 2.05
COL13A1-213ENST00000520267 ACTRT1Q8TDG2 376 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 CTNNBL1Q8WYA6 563 aaPredicted RBP27.87■■■□□ 2.05
COL13A1-213ENST00000520267 KIFAP3Q92845 792 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 HVCN1Q96D96 273 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 EPB41L5Q9HCM4 733 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 GPRC5DQ9NZD1 345 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 AFG3L2Q9Y4W6 797 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 NFASCO94856 1347 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 SPDYE16A6NNV3 312 aaPredicted RBP27.87■■■□□ 2.05
COL13A1-213ENST00000520267 BUB1BO60566 1050 aaPredicted RBP27.87■■■□□ 2.05
COL13A1-213ENST00000520267 HIRAP54198 1017 aaPredicted RBP27.87■■■□□ 2.05
COL13A1-213ENST00000520267 GUCY2DQ02846 1103 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 SLC39A4Q6P5W5 647 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 IFT20Q8IY31 132 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 NTPCRQ9BSD7 190 aaKnown RBP27.87■■■□□ 2.05
COL13A1-213ENST00000520267 THAP2Q9H0W7 228 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 SLC9A2Q9UBY0 812 aa27.87■■■□□ 2.05
COL13A1-213ENST00000520267 POLR2AP24928 1970 aaKnown RBP27.86■■■□□ 2.05
COL13A1-213ENST00000520267 RNF40O75150 1001 aa27.86■■■□□ 2.05
COL13A1-213ENST00000520267 CARSP49589 748 aaKnown RBP27.86■■■□□ 2.05
COL13A1-213ENST00000520267 MCCD1P59942 119 aaPredicted RBP27.86■■■□□ 2.05
COL13A1-213ENST00000520267 MAP2K1Q02750 393 aaPredicted RBP27.86■■■□□ 2.05
COL13A1-213ENST00000520267 KLHL7Q8IXQ5 586 aa27.86■■■□□ 2.05
COL13A1-213ENST00000520267 SCFD2Q8WU76 684 aa27.86■■■□□ 2.05
COL13A1-213ENST00000520267 SPIRE2Q8WWL2 714 aa27.86■■■□□ 2.05
COL13A1-213ENST00000520267 UTRNP46939 3433 aa27.86■■■□□ 2.05
COL13A1-213ENST00000520267 ADGRA3Q8IWK6 1321 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 ESYT3A0FGR9 886 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 PMM2O15305 246 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 ACTR2P61160 394 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 CCDC127Q96BQ5 260 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 HES6Q96HZ4 224 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 PDLIM7Q9NR12 457 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 WDR90Q96KV7 1748 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 TNNC1P63316 161 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 PPATQ06203 517 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 R3HDM1Q15032 1099 aaKnown RBP27.85■■■□□ 2.05
COL13A1-213ENST00000520267 EMBQ6PCB8 327 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 SEMA4DQ92854 862 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 POP1Q99575 1024 aaKnown RBP27.85■■■□□ 2.05
COL13A1-213ENST00000520267 XPNPEP1Q9NQW7 623 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 PSD3Q9NYI0 1048 aa27.85■■■□□ 2.05
COL13A1-213ENST00000520267 SEPT9Q9UHD8 586 aaPredicted RBP27.85■■■□□ 2.05
COL13A1-213ENST00000520267 SPATA31C2B4DYI2 1134 aa27.84■■■□□ 2.05
COL13A1-213ENST00000520267 RAD51CO43502 376 aa27.84■■■□□ 2.05
COL13A1-213ENST00000520267 NOL9Q5SY16 702 aaKnown RBP27.84■■■□□ 2.05
COL13A1-213ENST00000520267 ABHD15Q6UXT9 468 aa27.84■■■□□ 2.05
COL13A1-213ENST00000520267 VTI1AQ96AJ9 217 aa27.84■■■□□ 2.05
COL13A1-213ENST00000520267 HOXC10Q9NYD6 342 aa27.84■■■□□ 2.05
COL13A1-213ENST00000520267 USP20Q9Y2K6 914 aa27.84■■■□□ 2.05
COL13A1-213ENST00000520267 DKC1O60832 514 aaKnown RBP eCLIP27.84■■■□□ 2.05
COL13A1-213ENST00000520267 PRKCEQ02156 737 aa27.84■■■□□ 2.05
COL13A1-213ENST00000520267 TSEN2Q8NCE0 465 aaKnown RBP27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms