RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 ANO5Q75V66 913 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 NPAS4Q8IUM7 802 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 KIAA0319LQ8IZA0 1049 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 SYT2Q8N9I0 419 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 RNF149Q8NC42 400 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 GOLGA5Q8TBA6 731 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 FAM200AQ8TCP9 573 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 FOXD4L4Q8WXT5 416 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 MRPS27Q92552 414 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 RAD54LQ92698 747 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 TRIM43Q96BQ3 446 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 BICD1Q96G01 975 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 USP28Q96RU2 1077 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 TSPAN18Q96SJ8 248 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 PCYT2Q99447 389 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 ARID3AQ99856 593 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 DNAI2Q9GZS0 605 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 POLR3FQ9H1D9 316 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 TMEM60Q9H2L4 133 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 ZHX3Q9H4I2 956 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 ELAC1Q9H777 363 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 KMT5AQ9NQR1 393 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 RGL1Q9NZL6 768 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 PIN4Q9Y237 131 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 PCDHA11Q9Y5I1 949 aa6.2□□□□□ -1.42
CTNNA1-220ENST00000520260 CCDC66A2RUB6 948 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 K7ERI5 159 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 KIAA0391O15091 583 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 AP5Z1O43299 807 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 GTPBP6O43824 516 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 ZNF862O60290 1169 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 MED24O75448 989 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 CAVIN2O95810 425 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 VTNP04004 478 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 SRGAP2CP0DJJ0 459 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 SRGAP2BP0DMP2 458 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 MAPTP10636 758 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 PLS3P13797 630 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 PLCG1P19174 1290 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 TRIM21P19474 475 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 CMA1P23946 247 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 MARCKSP29966 332 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 CDC25BP30305 580 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 SYKP43405 635 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 SARSP49591 514 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 CLCN3P51790 818 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 SNRPFP62306 86 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 PRPF4BQ13523 1007 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 POSTNQ15063 836 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 UGCGQ16739 394 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 PTPROQ16827 1216 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 TMEM119Q4V9L6 283 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 NAALADL2Q58DX5 795 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 MARCH8Q5T0T0 291 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 SPOUT1Q5T280 376 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 TMEM63BQ5T3F8 832 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 PLA2G4FQ68DD2 849 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 SLFN12LQ6IEE8 588 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 ZNF365Q70YC5 407 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 OTOP2Q7RTS6 562 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 GPBP1Q86WP2 473 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 FAM178BQ8IXR5 827 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 MYOCDQ8IZQ8 938 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 C17orf53Q8N3J3 647 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 LRRC71Q8N4P6 559 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 MYCT1Q8N699 235 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 C4orf32Q8N8J7 132 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 PIGOQ8TEQ8 1089 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 SPIRE2Q8WWL2 714 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 PRPF31Q8WWY3 499 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 SYMPKQ92797 1274 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 SCLYQ96I15 445 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 FAM193BQ96PV7 902 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 UIMC1Q96RL1 719 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 RPS6KC1Q96S38 1066 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 GAS2L1Q99501 681 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 RAD9AQ99638 391 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 OSMRQ99650 979 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 TCHPQ9BT92 498 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 MRPL4Q9BYD3 311 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 CSRNP2Q9H175 543 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 WNT8AQ9H1J5 351 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 TMEM206Q9H813 350 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 TMEM51Q9NW97 253 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 TMEM161AQ9NX61 479 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 PUF60Q9UHX1 559 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 FBXO2Q9UK22 296 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 RCOR1Q9UKL0 485 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 CLIC4Q9Y696 253 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 TANC1Q9C0D5 1861 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 UBE4BO95155 1302 aa6.19□□□□□ -1.42
CTNNA1-220ENST00000520260 K7ENM7 598 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 GFRA3O60609 400 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 LDHAP00338 332 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 SPATA31C1P0DKV0 1188 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 IDEP14735 1019 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 PAX3P23760 479 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 LIG4P49917 911 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 NPEPPSP55786 919 aa6.18□□□□□ -1.42
CTNNA1-220ENST00000520260 PTENP60484 403 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms