RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 RNF135Q8IUD6 432 aa28.18■■■□□ 2.1
VEGFA-220ENST00000519767 CCDC83Q8IWF9 413 aa28.18■■■□□ 2.1
VEGFA-220ENST00000519767 CCDC51Q96ER9 411 aa28.18■■■□□ 2.1
VEGFA-220ENST00000519767 PHF7Q9BWX1 381 aaPredicted RBP28.18■■■□□ 2.1
VEGFA-220ENST00000519767 NRDE2Q9H7Z3 1164 aa28.18■■■□□ 2.1
VEGFA-220ENST00000519767 SH2B1Q9NRF2 756 aaPredicted RBP28.18■■■□□ 2.1
VEGFA-220ENST00000519767 INPP5FQ9Y2H2 1132 aa28.18■■■□□ 2.1
VEGFA-220ENST00000519767 WNT7AO00755 349 aa28.17■■■□□ 2.1
VEGFA-220ENST00000519767 GALTP07902 379 aa28.17■■■□□ 2.1
VEGFA-220ENST00000519767 ATP2B1P20020 1258 aa28.17■■■□□ 2.1
VEGFA-220ENST00000519767 ARL2P36404 184 aa28.17■■■□□ 2.1
VEGFA-220ENST00000519767 TECP42680 631 aa28.17■■■□□ 2.1
VEGFA-220ENST00000519767 RBM25P49756 843 aaKnown RBP28.17■■■□□ 2.1
VEGFA-220ENST00000519767 RBM10P98175 930 aaKnown RBP28.17■■■□□ 2.1
VEGFA-220ENST00000519767 HERC4Q5GLZ8 1057 aaPredicted RBP28.17■■■□□ 2.1
VEGFA-220ENST00000519767 AGMOQ6ZNB7 445 aa28.17■■■□□ 2.1
VEGFA-220ENST00000519767 VPS52Q8N1B4 723 aa28.17■■■□□ 2.1
VEGFA-220ENST00000519767 SUSD6Q92537 303 aa28.17■■■□□ 2.1
VEGFA-220ENST00000519767 IGSF21Q96ID5 467 aa28.17■■■□□ 2.1
VEGFA-220ENST00000519767 RSAD1Q9HA92 442 aa28.17■■■□□ 2.1
VEGFA-220ENST00000519767 TUFT1Q9NNX1 390 aa28.17■■■□□ 2.1
VEGFA-220ENST00000519767 TRIOO75962 3097 aa28.16■■■□□ 2.1
VEGFA-220ENST00000519767 MEIS3P2A8K0S8 358 aa28.16■■■□□ 2.1
VEGFA-220ENST00000519767 LOC730098B7Z3J9 87 aa28.16■■■□□ 2.1
VEGFA-220ENST00000519767 NCLP19338 710 aaKnown RBP28.16■■■□□ 2.1
VEGFA-220ENST00000519767 RARRES1P49788 294 aa28.16■■■□□ 2.1
VEGFA-220ENST00000519767 GUCY1B3Q02153 619 aa28.16■■■□□ 2.1
VEGFA-220ENST00000519767 UBXN11Q5T124 520 aa28.16■■■□□ 2.1
VEGFA-220ENST00000519767 TMEM87AQ8NBN3 555 aa28.16■■■□□ 2.1
VEGFA-220ENST00000519767 FBXO18Q8NFZ0 1043 aa28.16■■■□□ 2.1
VEGFA-220ENST00000519767 CASP10Q92851 521 aa28.16■■■□□ 2.1
VEGFA-220ENST00000519767 NFKBIZQ9BYH8 718 aa28.16■■■□□ 2.1
VEGFA-220ENST00000519767 S1PR5Q9H228 398 aa28.16■■■□□ 2.1
VEGFA-220ENST00000519767 TMEM60Q9H2L4 133 aa28.16■■■□□ 2.1
VEGFA-220ENST00000519767 IRAK3Q9Y616 596 aa28.16■■■□□ 2.1
VEGFA-220ENST00000519767 ALDH2P05091 517 aa28.15■■■□□ 2.1
VEGFA-220ENST00000519767 CBX2Q14781 532 aaPredicted RBP28.15■■■□□ 2.1
VEGFA-220ENST00000519767 NOTUMQ6P988 496 aa28.15■■■□□ 2.1
VEGFA-220ENST00000519767 FAM184AQ8NB25 1140 aa28.15■■■□□ 2.1
VEGFA-220ENST00000519767 PIGOQ8TEQ8 1089 aa28.15■■■□□ 2.1
VEGFA-220ENST00000519767 FAM193BQ96PV7 902 aaPredicted RBP28.15■■■□□ 2.1
VEGFA-220ENST00000519767 NACC1Q96RE7 527 aa28.15■■■□□ 2.1
VEGFA-220ENST00000519767 INO80B-WBP1J3KQ70 363 aa28.14■■■□□ 2.1
VEGFA-220ENST00000519767 SPATA31C1P0DKV0 1188 aa28.14■■■□□ 2.1
VEGFA-220ENST00000519767 TPRNQ4KMQ1 711 aa28.14■■■□□ 2.1
VEGFA-220ENST00000519767 LLGL2Q6P1M3 1020 aa28.14■■■□□ 2.1
VEGFA-220ENST00000519767 ERMNQ8TAM6 284 aa28.14■■■□□ 2.1
VEGFA-220ENST00000519767 TMEM175Q9BSA9 504 aa28.14■■■□□ 2.1
VEGFA-220ENST00000519767 POLR3CQ9BUI4 534 aaPredicted RBP28.14■■■□□ 2.1
VEGFA-220ENST00000519767 DBR1Q9UK59 544 aaKnown RBP28.14■■■□□ 2.1
VEGFA-220ENST00000519767 POTEMA6NI47 508 aa28.13■■■□□ 2.09
VEGFA-220ENST00000519767 TSPAN1O60635 241 aa28.13■■■□□ 2.09
VEGFA-220ENST00000519767 CTSAP10619 480 aa28.13■■■□□ 2.09
VEGFA-220ENST00000519767 ITGA4P13612 1032 aa28.13■■■□□ 2.09
VEGFA-220ENST00000519767 TRAPPC10P48553 1259 aa28.13■■■□□ 2.09
VEGFA-220ENST00000519767 GNL2Q13823 731 aaKnown RBP28.13■■■□□ 2.09
VEGFA-220ENST00000519767 SYCE2Q6PIF2 218 aa28.13■■■□□ 2.09
VEGFA-220ENST00000519767 CATSPER3Q86XQ3 398 aa28.13■■■□□ 2.09
VEGFA-220ENST00000519767 ZNF280BQ86YH2 543 aa28.13■■■□□ 2.09
VEGFA-220ENST00000519767 ASAP3Q8TDY4 903 aa28.13■■■□□ 2.09
VEGFA-220ENST00000519767 GBP3Q9H0R5 595 aa28.13■■■□□ 2.09
VEGFA-220ENST00000519767 ZBP1Q9H171 429 aa28.13■■■□□ 2.09
VEGFA-220ENST00000519767 CLASP2O75122 1294 aaKnown RBP28.12■■■□□ 2.09
VEGFA-220ENST00000519767 SLC11A1P49279 550 aa28.12■■■□□ 2.09
VEGFA-220ENST00000519767 CAPSQ13938 189 aa28.12■■■□□ 2.09
VEGFA-220ENST00000519767 ZNF174Q15697 407 aa28.12■■■□□ 2.09
VEGFA-220ENST00000519767 SMG8Q8ND04 991 aaKnown RBP28.12■■■□□ 2.09
VEGFA-220ENST00000519767 MCPH1Q8NEM0 835 aa28.12■■■□□ 2.09
VEGFA-220ENST00000519767 FAM122AQ96E09 287 aa28.12■■■□□ 2.09
VEGFA-220ENST00000519767 KIF2CQ99661 725 aa28.12■■■□□ 2.09
VEGFA-220ENST00000519767 CSRNP2Q9H175 543 aa28.12■■■□□ 2.09
VEGFA-220ENST00000519767 DNAJB4Q9UDY4 337 aa28.12■■■□□ 2.09
VEGFA-220ENST00000519767 MUTYHQ9UIF7 546 aa28.12■■■□□ 2.09
VEGFA-220ENST00000519767 OR52Z1P0C646 297 aa28.11■■■□□ 2.09
VEGFA-220ENST00000519767 GLRA2P23416 452 aa28.11■■■□□ 2.09
VEGFA-220ENST00000519767 CA8P35219 290 aa28.11■■■□□ 2.09
VEGFA-220ENST00000519767 MBTD1Q05BQ5 628 aa28.11■■■□□ 2.09
VEGFA-220ENST00000519767 ITIH3Q06033 890 aa28.11■■■□□ 2.09
VEGFA-220ENST00000519767 CES5AQ6NT32 575 aa28.11■■■□□ 2.09
VEGFA-220ENST00000519767 TMEM173Q86WV6 379 aaPredicted RBP28.11■■■□□ 2.09
VEGFA-220ENST00000519767 NOSTRINQ8IVI9 506 aa28.11■■■□□ 2.09
VEGFA-220ENST00000519767 HACE1Q8IYU2 909 aa28.11■■■□□ 2.09
VEGFA-220ENST00000519767 FAN1Q9Y2M0 1017 aa28.11■■■□□ 2.09
VEGFA-220ENST00000519767 IPPQ9Y573 584 aa28.11■■■□□ 2.09
VEGFA-220ENST00000519767 HCFC2Q9Y5Z7 792 aa28.11■■■□□ 2.09
VEGFA-220ENST00000519767 INPPL1O15357 1258 aa28.1■■■□□ 2.09
VEGFA-220ENST00000519767 DDHD2O94830 711 aa28.1■■■□□ 2.09
VEGFA-220ENST00000519767 MUTP22033 750 aa28.1■■■□□ 2.09
VEGFA-220ENST00000519767 RPA1P27694 616 aa28.1■■■□□ 2.09
VEGFA-220ENST00000519767 PLA2G5P39877 138 aa28.1■■■□□ 2.09
VEGFA-220ENST00000519767 EDAQ92838 391 aa28.1■■■□□ 2.09
VEGFA-220ENST00000519767 RPGRIP1Q96KN7 1286 aa28.1■■■□□ 2.09
VEGFA-220ENST00000519767 POLR3FQ9H1D9 316 aaPredicted RBP28.1■■■□□ 2.09
VEGFA-220ENST00000519767 NOL7Q9UMY1 257 aaKnown RBP28.1■■■□□ 2.09
VEGFA-220ENST00000519767 A0A087WWV3 80 aa28.09■■■□□ 2.09
VEGFA-220ENST00000519767 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.09■■■□□ 2.09
VEGFA-220ENST00000519767 USO1O60763 962 aaKnown RBP28.09■■■□□ 2.09
VEGFA-220ENST00000519767 AMHR2Q16671 573 aa28.09■■■□□ 2.09
VEGFA-220ENST00000519767 C8orf34Q49A92 452 aa28.09■■■□□ 2.09
VEGFA-220ENST00000519767 TTC38Q5R3I4 469 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms