RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 SH2D4AQ9H788 454 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 C6orf50Q9HD87 102 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 MTMR4Q9NYA4 1195 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 INTUQ9ULD6 942 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 TRIM33Q9UPN9 1127 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 GDAQ9Y2T3 454 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 LUC7L2Q9Y383 392 aaKnown RBP9.1□□□□□ -0.95
TRPS1-209ENST00000519674 G3V3G9 751 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 BIRC5O15392 142 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 SLURP2P0DP57 97 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 GNA11P29992 359 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 NONOQ15233 471 aaKnown RBP eCLIP9.1□□□□□ -0.95
TRPS1-209ENST00000519674 SLC44A4Q53GD3 710 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 DCAF8Q5TAQ9 597 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 KLC3Q6P597 504 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 ABHD8Q96I13 439 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 DPH5Q9H2P9 285 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 RXFP1Q9HBX9 757 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 USP40Q9NVE5 1235 aa9.1□□□□□ -0.95
TRPS1-209ENST00000519674 KIAA1522Q9P206 1035 aaPredicted RBP9.1□□□□□ -0.95
TRPS1-209ENST00000519674 USP15Q9Y4E8 981 aaPredicted RBP9.1□□□□□ -0.95
TRPS1-209ENST00000519674 WDR46O15213 610 aaKnown RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 P4HA2O15460 535 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 ATP9AO75110 1047 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 UNC5CO95185 931 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 GJB6O95452 261 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 MMP10P09238 476 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 TROVE2P10155 538 aaKnown RBP eCLIP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 SKIP12755 728 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 NPR1P16066 1061 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 GABPAQ06546 454 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 SPAG1Q07617 926 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 PAK1Q13153 545 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 MTMR3Q13615 1198 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 GSTA3Q16772 222 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 LIN52Q52LA3 116 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 ZC2HC1CQ53FD0 456 aaPredicted RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 ZNF658Q5TYW1 1059 aaPredicted RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 KRT25Q7Z3Z0 450 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 NLGN1Q8N2Q7 840 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 TLR10Q9BXR5 811 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 PPP1R12CQ9BZL4 782 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 VPS16Q9H269 839 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 FAM114A2Q9NRY5 505 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 SERPINB13Q9UIV8 391 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 PNMA3Q9UL41 463 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 R3HDM2Q9Y2K5 976 aaKnown RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 hCG_2014768A0A024R1R8 64 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 A0A1W2PQC6 194 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 EIF3FO00303 357 aaPredicted RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 ECE2O60344 883 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 PDE6CP51160 858 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 CUL1Q13616 776 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 KPNB1Q14974 876 aaKnown RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 BCL2A1Q16548 175 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 TCERG1LQ5VWI1 586 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 THOC7Q6I9Y2 204 aaKnown RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 SCUBE1Q8IWY4 988 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 REXO1Q8N1G1 1221 aaKnown RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 FITM2Q8N6M3 262 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 SUPT20HQ8NEM7 779 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 DEPTORQ8TB45 409 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 TBCKQ8TEA7 893 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 LRRC15Q8TF66 581 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 NELFBQ8WX92 580 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 COA7Q96BR5 231 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 NR1H4Q96RI1 486 aaPredicted RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 NUDCD1Q96RS6 583 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 NHEJ1Q9H9Q4 299 aaPredicted RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 DBNDD1Q9H9R9 158 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 TMEM260Q9NX78 707 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 SUCLA2Q9P2R7 463 aaPredicted RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 GGT7Q9UJ14 662 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 ZNF148Q9UQR1 794 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 BTBD19C9JJ37 291 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 LAD1O00515 517 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 ZNF263O14978 683 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 OR52Z1P0C646 297 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 COL11A2P13942 1736 aaPredicted RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 PORP16435 677 aaPredicted RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 VHLP40337 213 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 PRCPP42785 496 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 DHX9Q08211 1270 aaKnown RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 NFIAQ12857 509 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 SMUG1Q53HV7 270 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 TCP11X2Q5H9J9 407 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 NANOGNBQ7Z5D8 188 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 NEK8Q86SG6 692 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 RETREG2Q8NC44 543 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 NEK9Q8TD19 979 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 SNRNP27Q8WVK2 155 aaKnown RBP9.09□□□□□ -0.95
TRPS1-209ENST00000519674 SNX27Q96L92 541 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 KCNQ5Q9NR82 932 aa9.09□□□□□ -0.95
TRPS1-209ENST00000519674 TRIM49BA6NDI0 452 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 TECP42680 631 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 NOVP48745 357 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 CACNB3P54284 484 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 GEMIN4P57678 1058 aaKnown RBP9.08□□□□□ -0.96
TRPS1-209ENST00000519674 WASHC2DQ5SRD0 308 aa9.08□□□□□ -0.96
TRPS1-209ENST00000519674 ZNF362Q5T0B9 420 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms