RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 DUSP11O75319 330 aaKnown RBP16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 LDHAP00338 332 aaKnown RBP16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 F2P00734 622 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 GNRH1P01148 92 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 KLRC1P26715 233 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 FLT3LGP49771 235 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 GOLGA8FQ08AF8 430 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 GOLGA8DPQ0D2H9 430 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 KCNMA1Q12791 1236 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 CETN1Q12798 172 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 MKRN4PQ13434 485 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 GBP6Q6ZN66 633 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 TAS1R3Q7RTX0 852 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 GPD1LQ8N335 351 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 LRRC71Q8N4P6 559 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 METTL13Q8N6R0 699 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 FBXL18Q96ME1 805 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 DNAJC7Q99615 494 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 MRPL4Q9BYD3 311 aaKnown RBP16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 PLCB1Q9NQ66 1216 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 RRAGDQ9NQL2 400 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 CEP72Q9P209 647 aa16.43■□□□□ 0.22
TRAPPC9-205ENST00000518839 TBC1D8O95759 1140 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 CYBAP13498 195 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 ADSSP30520 456 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 PHKA2P46019 1235 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 VAMP7P51809 220 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 IGBP1P78318 339 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 CDC42EP1Q00587 391 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 DRP2Q13474 957 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 ARHGEF6Q15052 776 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 GRIK4Q16099 956 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 MAPK6Q16659 721 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 EXOC3L4Q17RC7 722 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 SLC39A4Q6P5W5 647 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 MTHFD1LQ6UB35 978 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 CYP26C1Q6V0L0 522 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 CACNA2D4Q7Z3S7 1137 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 RHPN2Q8IUC4 686 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 LINC01465Q8N7H1 131 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 RNF149Q8NC42 400 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 TMC2Q8TDI7 906 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 TRAPPC12Q8WVT3 735 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 MAP7D2Q96T17 732 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 LSM14BQ9BX40 385 aaKnown RBP16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 ARHGAP39Q9C0H5 1083 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 SPC25Q9HBM1 224 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 GABRQQ9UN88 632 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 NRCAMQ92823 1304 aa16.42■□□□□ 0.22
TRAPPC9-205ENST00000518839 TISP43B9A030 160 aa16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 PMM2O15305 246 aa16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 ZSCAN12O43309 604 aa16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 EXTL3O43909 919 aa16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 FMO5P49326 533 aa16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 KLK7P49862 253 aa16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 PRKCZQ05513 592 aa16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 SNRNP35Q16560 246 aaKnown RBP16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 IFNLR1Q8IU57 520 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 TRIB2Q92519 343 aa16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 CCDC113Q9H0I3 377 aa16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 FAM207AQ9NSI2 230 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 RNF186Q9NXI6 227 aa16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 FBXL5Q9UKA1 691 aa16.41■□□□□ 0.22
TRAPPC9-205ENST00000518839 GOLGA6L9A6NEM1 432 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 ZNF233A6NK53 670 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 HAS3O00219 553 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 ZEB2O60315 1214 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 PRKCBP05771 671 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 SRGAP2CP0DJJ0 459 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 HNRNPH3P31942 346 aaKnown RBP16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 PSEN2P49810 448 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 CLCN3P51790 818 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 GJA9P57773 515 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 PTENP60484 403 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 CDK17Q00537 523 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 MFSD10Q14728 455 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 MEA1Q16626 185 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 FSCN1Q16658 493 aaKnown RBP16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 CCAR2Q8N163 923 aaKnown RBP16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 RDH13Q8NBN7 331 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 SYN2Q92777 582 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 MFSD14AQ96MC6 490 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 UPF3AQ9H1J1 476 aaKnown RBP16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 GCNT4Q9P109 453 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 SRRDQ9UH36 339 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 AGO2Q9UKV8 859 aaKnown RBP16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 MYO6Q9UM54 1294 aa16.4■□□□□ 0.22
TRAPPC9-205ENST00000518839 RNF225M0QZC1 329 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 ACKR2O00590 384 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 SEPT4O43236 478 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 MSCO60682 206 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 TRPA1O75762 1119 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 MYL3P08590 195 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 RFX1P22670 979 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 GTF2H1P32780 548 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 VEGFBP49765 207 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 NKX3-2P78367 333 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 MYL7Q01449 175 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 FAM187BQ17R55 369 aa16.39■□□□□ 0.21
TRAPPC9-205ENST00000518839 KIAA0753Q2KHM9 967 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms