RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 TMEM199Q8N511 208 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 ANKRD44Q8N8A2 993 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 C19orf47Q8N9M1 422 aaKnown RBP7.44□□□□□ -1.22
CCDC6-203ENST00000518638 FEZ1Q99689 392 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 GPR62Q9BZJ7 368 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 SLC28A3Q9HAS3 691 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 PARD6AQ9NPB6 346 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 XPNPEP3Q9NQH7 507 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 SMG5Q9UPR3 1016 aaKnown RBP7.44□□□□□ -1.22
CCDC6-203ENST00000518638 HDAC5Q9UQL6 1122 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 ZNF521Q96K83 1311 aa7.44□□□□□ -1.22
CCDC6-203ENST00000518638 ETV2O00321 342 aaPredicted RBP7.43□□□□□ -1.22
CCDC6-203ENST00000518638 PQBP1O60828 265 aaKnown RBP7.43□□□□□ -1.22
CCDC6-203ENST00000518638 BAG3O95817 575 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 TIMP1P01033 207 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 HLA-DOAP06340 250 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 FGRP09769 529 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 SRFP11831 508 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 ADORA2AP29274 412 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 IL15P40933 162 aaPredicted RBP7.43□□□□□ -1.22
CCDC6-203ENST00000518638 PHKA1P46020 1223 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 MECOMQ03112 1051 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 ARID5AQ03989 594 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 MVPQ14764 893 aaKnown RBP7.43□□□□□ -1.22
CCDC6-203ENST00000518638 MFSD5Q6N075 450 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 UNC5AQ6ZN44 842 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 TEX11Q8IYF3 940 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 MB21D1Q8N884 522 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 SHCBP1Q8NEM2 672 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 NPLOC4Q8TAT6 608 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 KLHDC4Q8TBB5 520 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 FERMT2Q96AC1 680 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 DHRS1Q96LJ7 313 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.43□□□□□ -1.223e-8■■■□□ 18.9
CCDC6-203ENST00000518638 DUSP15Q9H1R2 295 aaPredicted RBP7.43□□□□□ -1.22
CCDC6-203ENST00000518638 SUCOQ9UBS9 1254 aaKnown RBP7.43□□□□□ -1.22
CCDC6-203ENST00000518638 ZBTB21Q9ULJ3 1066 aa7.43□□□□□ -1.22
CCDC6-203ENST00000518638 TCF20Q9UGU0 1960 aaKnown RBP7.42□□□□□ -1.22
CCDC6-203ENST00000518638 MYO9BQ13459 2157 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 LRRC37A2A6NM11 1700 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 A0A1W2PQ45 241 aaPredicted RBP7.42□□□□□ -1.22
CCDC6-203ENST00000518638 A0A1W2PQY0 241 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 ITGB8P26012 769 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 MRE11P49959 708 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 EPHB4P54760 987 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 RASGRF1Q13972 1273 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 ZYXQ15942 572 aaKnown RBP7.42□□□□□ -1.22
CCDC6-203ENST00000518638 FAM47AQ5JRC9 791 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 CERS3Q8IU89 383 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 WDR63Q8IWG1 891 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 TRPV1Q8NER1 839 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 CCDC120Q96HB5 630 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 KIAA1683Q9H0B3 1180 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 TRIT1Q9H3H1 467 aaKnown RBP7.42□□□□□ -1.22
CCDC6-203ENST00000518638 STARD7Q9NQZ5 370 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 SLC12A7Q9Y666 1083 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 SIPA1L1O43166 1804 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 FOCADQ5VW36 1801 aa7.42□□□□□ -1.22
CCDC6-203ENST00000518638 LAMA2P24043 3122 aaKnown RBP7.42□□□□□ -1.22
CCDC6-203ENST00000518638 PIEZO1Q92508 2521 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 FAM86C2PA6NEL3 165 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 FOXD2O60548 495 aaPredicted RBP7.41□□□□□ -1.22
CCDC6-203ENST00000518638 PEX10O60683 326 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 CNMDO75829 334 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 SSBP05455 408 aaKnown RBP eCLIP7.41□□□□□ -1.22
CCDC6-203ENST00000518638 AKR1A1P14550 325 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 DNAJA1P31689 397 aaKnown RBP7.41□□□□□ -1.22
CCDC6-203ENST00000518638 PMS1P54277 932 aaKnown RBP7.41□□□□□ -1.22
CCDC6-203ENST00000518638 EXOSC9Q06265 439 aaKnown RBP7.41□□□□□ -1.22
CCDC6-203ENST00000518638 TMEM240Q5SV17 173 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 CATSPERGQ6ZRH7 1159 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 ATG9AQ7Z3C6 839 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 TTC6Q86TZ1 520 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 FAM169BQ8N8A8 192 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 ZNF512BQ96KM6 892 aaPredicted RBP7.41□□□□□ -1.22
CCDC6-203ENST00000518638 GLT1D1Q96MS3 346 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 MROH8Q9H579 483 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 KCNK12Q9HB15 430 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 ATP13A1Q9HD20 1204 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 HOXC10Q9NYD6 342 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 TBX21Q9UL17 535 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 ELP1O95163 1332 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 PTPRCP08575 1304 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 A0A0G2JMZ2 1700 aa7.41□□□□□ -1.22
CCDC6-203ENST00000518638 A0A1W2PQH9 124 aa7.4□□□□□ -1.22
CCDC6-203ENST00000518638 PI4K2BG5E9Z4 385 aa7.4□□□□□ -1.22
CCDC6-203ENST00000518638 FCER1AP12319 257 aa7.4□□□□□ -1.22
CCDC6-203ENST00000518638 VCAM1P19320 739 aa7.4□□□□□ -1.22
CCDC6-203ENST00000518638 POU3F3P20264 500 aaPredicted RBP7.4□□□□□ -1.22
CCDC6-203ENST00000518638 RRP1BQ14684 758 aaKnown RBP7.4□□□□□ -1.22
CCDC6-203ENST00000518638 ANO1Q5XXA6 986 aa7.4□□□□□ -1.22
CCDC6-203ENST00000518638 PPFIBP1Q86W92 1011 aa7.4□□□□□ -1.22
CCDC6-203ENST00000518638 MCF2L2Q86YR7 1114 aa7.4□□□□□ -1.22
CCDC6-203ENST00000518638 UBE2FQ969M7 185 aa7.4□□□□□ -1.22
CCDC6-203ENST00000518638 NSUN4Q96CB9 384 aaKnown RBP7.4□□□□□ -1.22
CCDC6-203ENST00000518638 ANAPC16Q96DE5 110 aa7.4□□□□□ -1.22
CCDC6-203ENST00000518638 MAML3Q96JK9 1138 aa7.4□□□□□ -1.22
CCDC6-203ENST00000518638 MKRN2Q9H000 416 aaKnown RBP7.4□□□□□ -1.22
CCDC6-203ENST00000518638 SPATC1LQ9H0A9 340 aa7.4□□□□□ -1.22
CCDC6-203ENST00000518638 IRF2BPLQ9H1B7 796 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms