RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 CDX2Q99626 313 aaPredicted RBP24.26■■□□□ 1.47
VEGFA-217ENST00000518538 NTPCRQ9BSD7 190 aaKnown RBP24.26■■□□□ 1.47
VEGFA-217ENST00000518538 PANK2Q9BZ23 570 aa24.26■■□□□ 1.47
VEGFA-217ENST00000518538 SCAND2PQ9GZW5 306 aaPredicted RBP24.26■■□□□ 1.47
VEGFA-217ENST00000518538 KMT5AQ9NQR1 393 aa24.26■■□□□ 1.47
VEGFA-217ENST00000518538 ARHGAP28Q9P2N2 729 aa24.26■■□□□ 1.47
VEGFA-217ENST00000518538 RBM19Q9Y4C8 960 aaKnown RBP24.26■■□□□ 1.47
VEGFA-217ENST00000518538 CNTNAP2Q9UHC6 1331 aa24.26■■□□□ 1.47
VEGFA-217ENST00000518538 KRT18P05783 430 aaKnown RBP24.25■■□□□ 1.47
VEGFA-217ENST00000518538 GIT2Q14161 759 aa24.25■■□□□ 1.47
VEGFA-217ENST00000518538 RESP18Q5W5W9 173 aa24.25■■□□□ 1.47
VEGFA-217ENST00000518538 SV2BQ7L1I2 683 aa24.25■■□□□ 1.47
VEGFA-217ENST00000518538 RNF169Q8NCN4 708 aa24.25■■□□□ 1.47
VEGFA-217ENST00000518538 ARNTL2Q8WYA1 636 aa24.25■■□□□ 1.47
VEGFA-217ENST00000518538 SAMD11Q96NU1 681 aa24.25■■□□□ 1.47
VEGFA-217ENST00000518538 PRDM12Q9H4Q4 367 aa24.25■■□□□ 1.47
VEGFA-217ENST00000518538 CERS4Q9HA82 394 aa24.25■■□□□ 1.47
VEGFA-217ENST00000518538 RNF19AQ9NV58 838 aa24.25■■□□□ 1.47
VEGFA-217ENST00000518538 LARSQ9P2J5 1176 aaKnown RBP24.25■■□□□ 1.47
VEGFA-217ENST00000518538 PCDHB2Q9Y5E7 798 aa24.25■■□□□ 1.47
VEGFA-217ENST00000518538 PHLPP2Q6ZVD8 1323 aa24.25■■□□□ 1.47
VEGFA-217ENST00000518538 A0A1B0GUA9 196 aa24.24■■□□□ 1.47
VEGFA-217ENST00000518538 TBKBP1A7MCY6 615 aa24.24■■□□□ 1.47
VEGFA-217ENST00000518538 ACKR2O00590 384 aa24.24■■□□□ 1.47
VEGFA-217ENST00000518538 ZNF131P52739 623 aa24.24■■□□□ 1.47
VEGFA-217ENST00000518538 PRPF4BQ13523 1007 aaKnown RBP24.24■■□□□ 1.47
VEGFA-217ENST00000518538 PAN2Q504Q3 1202 aaKnown RBP24.24■■□□□ 1.47
VEGFA-217ENST00000518538 C17orf80Q9BSJ5 609 aa24.24■■□□□ 1.47
VEGFA-217ENST00000518538 TMEM117Q9H0C3 514 aa24.24■■□□□ 1.47
VEGFA-217ENST00000518538 TMEM134Q9H6X4 195 aa24.24■■□□□ 1.47
VEGFA-217ENST00000518538 FAM13BQ9NYF5 915 aa24.24■■□□□ 1.47
VEGFA-217ENST00000518538 K7ERI5 159 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 FAM13AO94988 1023 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 LINC00271P0C7V0 271 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 LIG1P18858 919 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 SMTNP53814 917 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 E2F4Q16254 413 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 MRPL10Q7Z7H8 261 aaKnown RBP24.23■■□□□ 1.47
VEGFA-217ENST00000518538 ABI1Q8IZP0 508 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 CNNM3Q8NE01 707 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 MYLIPQ8WY64 445 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 CLP1Q92989 425 aaKnown RBP24.23■■□□□ 1.47
VEGFA-217ENST00000518538 PGBD4Q96DM1 585 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 CASD1Q96PB1 797 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 EIF2AQ9BY44 585 aaKnown RBP24.23■■□□□ 1.47
VEGFA-217ENST00000518538 CUEDC2Q9H467 287 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 PARVGQ9HBI0 331 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 MTUS1Q9ULD2 1270 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 CIZ1Q9ULV3 898 aaPredicted RBP24.23■■□□□ 1.47
VEGFA-217ENST00000518538 RWDD3Q9Y3V2 267 aa24.23■■□□□ 1.47
VEGFA-217ENST00000518538 EPOPA6NHQ4 379 aa24.22■■□□□ 1.47
VEGFA-217ENST00000518538 SLC16A4O15374 487 aa24.22■■□□□ 1.47
VEGFA-217ENST00000518538 TBCAO75347 108 aaKnown RBP24.22■■□□□ 1.47
VEGFA-217ENST00000518538 CLLU1OSQ5K130 101 aa24.22■■□□□ 1.47
VEGFA-217ENST00000518538 ADALQ6DHV7 355 aa24.22■■□□□ 1.47
VEGFA-217ENST00000518538 SLC27A1Q6PCB7 646 aa24.22■■□□□ 1.47
VEGFA-217ENST00000518538 IQUBQ8NA54 791 aa24.22■■□□□ 1.47
VEGFA-217ENST00000518538 RSPH1Q8WYR4 309 aa24.22■■□□□ 1.47
VEGFA-217ENST00000518538 DDX12PQ92771 950 aa24.22■■□□□ 1.47
VEGFA-217ENST00000518538 DHX58Q96C10 678 aa24.22■■□□□ 1.47
VEGFA-217ENST00000518538 MRPL42Q9Y6G3 142 aaKnown RBP24.22■■□□□ 1.47
VEGFA-217ENST00000518538 MYMKA6NI61 221 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 TTLL13PA6NNM8 815 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 H0YCG3 227 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 N4BP3O15049 544 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 EDN1P05305 212 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 TMEM132AQ24JP5 1023 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 EPC2Q52LR7 807 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 TAS1R3Q7RTX0 852 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 TMEM192Q8IY95 271 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 MYCT1Q8N699 235 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 SMG8Q8ND04 991 aaKnown RBP24.21■■□□□ 1.47
VEGFA-217ENST00000518538 TMEM161BQ8NDZ6 487 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 LPPQ93052 612 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 GAS2L1Q99501 681 aaPredicted RBP24.21■■□□□ 1.47
VEGFA-217ENST00000518538 TRIM6Q9C030 488 aaPredicted RBP24.21■■□□□ 1.47
VEGFA-217ENST00000518538 PDZD7Q9H5P4 517 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 IPPQ9Y573 584 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 CHD9Q3L8U1 2897 aa24.21■■□□□ 1.47
VEGFA-217ENST00000518538 FNDC1Q4ZHG4 1894 aaPredicted RBP24.21■■□□□ 1.47
VEGFA-217ENST00000518538 NCKAP1LP55160 1127 aa24.2■■□□□ 1.46
VEGFA-217ENST00000518538 DYMQ7RTS9 669 aa24.2■■□□□ 1.46
VEGFA-217ENST00000518538 CDR2LQ86X02 465 aaPredicted RBP24.2■■□□□ 1.46
VEGFA-217ENST00000518538 LRRC43Q8N309 656 aa24.2■■□□□ 1.46
VEGFA-217ENST00000518538 FBXO22Q8NEZ5 403 aa24.2■■□□□ 1.46
VEGFA-217ENST00000518538 HELQQ8TDG4 1101 aa24.2■■□□□ 1.46
VEGFA-217ENST00000518538 KCNN1Q92952 543 aa24.2■■□□□ 1.46
VEGFA-217ENST00000518538 PYM1Q9BRP8 204 aaKnown RBP24.2■■□□□ 1.46
VEGFA-217ENST00000518538 TNMDQ9H2S6 317 aa24.2■■□□□ 1.46
VEGFA-217ENST00000518538 ZHX3Q9H4I2 956 aa24.2■■□□□ 1.46
VEGFA-217ENST00000518538 STXBP5LQ9Y2K9 1186 aa24.2■■□□□ 1.46
VEGFA-217ENST00000518538 RALGAPA2Q2PPJ7 1873 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 MEIS3P2A8K0S8 358 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 C5orf67F2Z3F1 127 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 RFXAPO00287 272 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 POLR2DO15514 142 aaKnown RBP24.19■■□□□ 1.46
VEGFA-217ENST00000518538 NPTXRO95502 500 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 MAPTP10636 758 aaKnown RBP24.19■■□□□ 1.46
VEGFA-217ENST00000518538 SCP2P22307 547 aa24.19■■□□□ 1.46
VEGFA-217ENST00000518538 CMA1P23946 247 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms